RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TRAV20A0A0B4J274 112 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TEX22C9J3V5 150 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 AREGP15514 252 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FAM120AOSQ5T036 256 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 LINC01356Q8N9X3 169 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MBD6Q96DN6 1003 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 LSM4Q9Y4Z0 139 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ZNF727A8MUV8 499 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RNF223E7ERA6 249 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MPDU1O75352 247 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TMEM11P17152 192 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 GATA3P23771 443 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 BRS3P32247 399 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 LOXL1Q08397 574 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 LURAP1LQ8IV03 231 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 BIN3Q9NQY0 253 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 SLC39A9Q9NUM3 307 aa15.66■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FAM106CPP0CH98 169 aa15.65■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RAB5AP20339 215 aa15.65■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TAGLN2P37802 199 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TVP23CQ96ET8 276 aa15.65■□□□□ 0.1
TNFRSF1A-201ENST00000162749 NIPSNAP3BQ9BS92 247 aa15.65■□□□□ 0.1
TNFRSF1A-201ENST00000162749 NCBP2LA6PVI3 153 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 FNDC10F2Z333 226 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OR2C1O95371 312 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 AVPP01185 164 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 PMS2P11Q13670 270 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MRPL41Q8IXM3 137 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ZNF709Q8N972 641 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ZNF114Q8NC26 417 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MGST2Q99735 147 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 HMGB3O15347 200 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SUB1P53999 127 aaKnown RBP eCLIP15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 RAB5BP61020 215 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CD69Q07108 199 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MLANAQ16655 118 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 FFAR4Q5NUL3 377 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SLC35E3Q7Z769 313 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 KRTAP1-3Q8IUG1 177 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SLC25A22Q9H936 323 aa15.64■□□□□ 0.09
TNFRSF1A-201ENST00000162749 C1orf196B1AJZ1 125 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 C17orf112F2Z3M2 114 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CNIH1O95406 144 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MEOX2P50222 304 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 TEPPQ6URK8 271 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OR10G9Q8NGN4 311 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OR10G7Q8NGN6 311 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 TMPRSS5Q9H3S3 457 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 VAX2Q9UIW0 290 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 A0A087WWC5 75 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 C19orf35Q6ZS72 473 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SSMEM1Q8WWF3 244 aa15.63■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CTXND1A0A1B0GTU2 59 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 GAMTQ14353 236 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 LINC00469Q8N7U9 141 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 GGTLC1Q9BX51 225 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 FNDC4Q9H6D8 234 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 IGKV1OR2-108A0A075B7D4 117 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 A0A0U1RQK1 487 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MBP02144 154 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MFAP2P55001 183 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 FXYD3Q14802 87 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 KLF17Q5JT82 389 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 PVRIGQ6DKI7 326 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CACNG8Q8WXS5 425 aa15.62■□□□□ 0.09
TNFRSF1A-201ENST00000162749 DEFA4P12838 97 aa15.61■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CD81P60033 236 aa15.61■□□□□ 0.09
TNFRSF1A-201ENST00000162749 PRSS57Q6UWY2 283 aa15.61■□□□□ 0.09
TNFRSF1A-201ENST00000162749 Q96MF0 132 aa15.61■□□□□ 0.09
TNFRSF1A-201ENST00000162749 FAM103A1Q9BTL3 118 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-201ENST00000162749 TGFAP01135 160 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 GPX4P36969 197 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OPRK1P41145 380 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ZNF562Q6V9R5 426 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SLC16A13Q7RTY0 426 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 TMEM144Q7Z5S9 345 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 Q8N9W7 124 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OR1P1Q8NH06 330 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 RAB24Q969Q5 203 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SRSF8Q9BRL6 282 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 CX3CL1P78423 397 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ZNF343Q6P1L6 599 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 C1RLQ9NZP8 487 aa15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 F11RQ9Y624 299 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-201ENST00000162749 IFNA1P01562 189 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SNRPEP62304 92 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 NDPQ00604 133 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 TMEM249Q2WGJ8 235 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 OR2T6Q8NHC8 308 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 GATAD1Q8WUU5 269 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ACTR3CQ9C0K3 210 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MEGF9Q9H1U4 602 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 DMRT1Q9Y5R6 373 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 SOX21Q9Y651 276 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 AKAP9Q99996 3911 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ELOBQ15370 118 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 MIC13Q5XKP0 118 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 RBMS3Q6XE24 437 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 ABHD5Q8WTS1 349 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms