RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Lgi3Q8K406 548 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Neil1Q8K4Q6 389 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Mob1aQ921Y0 216 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tctex1d2Q9CQ66 144 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Klk1b27Q9JM71 263 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Syt9Q9R0N9 491 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gm14412A2ARR7 526 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Aadacl4B1AVU5 407 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Vmn1r174E9PYW5 313 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Vmn1r173E9Q8V7 313 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr178E9Q9T3 319 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Prdx6O08709 224 aaKnown RBP5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Mrpl23O35972 146 aaKnown RBP5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Slc6a1P31648 599 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Hes1P35428 282 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Fxyd3Q61835 88 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 IfnkQ7TSL0 199 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Aadacl4Q8BM81 407 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Wfdc21Q8BTE6 63 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ido2Q8R0V5 405 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr435Q8VFS3 313 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Mrpl42Q9CPV3 142 aa5.88□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gm10778A0A087WNP5 499 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Trav12-2A0N8N6 114 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gm9602J3QPD5 205 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Adam10O35598 749 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Fut9O88819 359 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Csf3P09920 208 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Bmpr1bP36898 502 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ctdsp1P58466 261 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 RelbQ04863 558 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ssbp4Q3U4B1 363 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Il31Q6EAL8 163 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tfap2eQ6VUP9 442 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr924Q7TRB8 308 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 PhyhiplQ8BGT8 375 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tmem255aQ8BHW5 351 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Peli1Q8C669 418 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Vmn1r237Q8R296 289 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Uqcc1Q9CWU6 295 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Dnajc4Q9D844 244 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Sec11cQ9D8V7 192 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr926Q9EQ98 308 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Hsd17b6Q9R092 317 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Trav15d-1-dv6d-1A0A075B624 124 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Platr25A0A1Y7VIZ1 466 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gm13083A2AGW5 501 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Sertad4A7DTG3 377 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tex45G3XA23 500 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr635K7N6B1 321 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gpr33O88416 339 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Zfp2P08043 459 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Hoxa1P09022 331 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 P18526 117 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Chrna7P49582 502 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tgfbr1Q64729 503 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Olfr1131Q7TR45 309 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Trmt61aQ80XC2 290 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Scgb3a2Q920H1 91 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Q9DAA3 117 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Cxcr6Q9EQ16 351 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Prss30Q9QYZ9 310 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Bpnt1Q9Z0S1 308 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ighv5-15A0A0A6YWC7 117 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Igkv1-135A0A0B4J1H7 120 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gm436B1AVU6 407 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Nsun4C4P6S0 806 aaKnown RBP5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 P01661 131 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 P01662 111 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 P01663 111 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Wnt5aP22725 380 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Nkx2-1P50220 372 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Crybb2P62696 205 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Gnb2P62880 340 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tmem184aQ3UFJ6 425 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Bhlhe23Q8BGW3 223 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Fam168aQ8BGZ2 244 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Exosc6Q8BTW3 273 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Prss35Q8C0F9 409 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Vmn1r37Q8R2E4 302 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Lamtor1Q9CQ22 161 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 CstadQ9D245 104 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ube2v2Q9D2M8 145 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Vmn1r171Q9EPS6 316 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Irak1bp1Q9ESJ7 259 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Atoh7Q9Z2E5 149 aa5.87□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Klri1B2KG20 248 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tbx15O70306 602 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Defa6P50704 93 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Fgf9P54130 208 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 HfeP70387 359 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 ScimpQ3UU41 150 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ceacam10Q61400 265 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 PnkdQ69ZP3 385 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Lrtm1Q8BXQ3 356 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Thyn1Q91YJ3 226 aa5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Mrps30Q9D0G0 442 aaKnown RBP5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Tet1Q3URK3 2007 aaKnown RBP5.86□□□□□ -1.47
Bdnf-201ENSMUST00000053317 Ighv5-4A0A075B5P9 117 aa5.86□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms