RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cryba1P02525 198 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Hnf1aP22361 628 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Zfp36l1P23950 338 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Pip5k1aP70182 546 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Rtn4rl2Q7M6Z0 420 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Dusp3Q9D7X3 185 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Kcnip1Q9JJ57 227 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 HaaoQ78JT3 286 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 ErasQ7TN89 227 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1396Q7TQS8 315 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 SergefQ80YD6 464 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Mrps10Q80ZK0 160 aaKnown RBP13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr469Q8VF66 314 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Nkg7Q99PA5 165 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Tmem239Q9DA47 151 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Trex2Q9R1A9 236 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Supt4h1bQ9Z199 117 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Ighv1-34A0A075B5V2 117 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Igkv14-100A0A0G2JG36 117 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Cks2P56390 79 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 EcscrQ3TZW0 214 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Rasl10bQ5SSG5 203 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Tle4Q62441 773 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Mtch2Q791V5 303 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Fam214bQ8BR27 538 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Slc25a41Q8BVN7 312 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Fam234aQ8C0Z1 555 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Chrdl1Q920C1 447 aa13.92□□□□□ -0.18
Shh-201ENSMUST00000002708 Rab19P35294 217 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 PjvkQ0ZLH2 352 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Zfp7Q3TFZ4 685 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Gpbar1Q80SS6 329 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Smco3Q8BQM7 225 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Pgam5Q8BX10 288 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Scgb2b26Q8JZX1 112 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr418A0A140T8J6 310 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Tcstv1O70619 171 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Wnt5aP22725 380 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 CortP56469 109 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Lclat1Q3UN02 376 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Slc34a1Q60825 637 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Paqr8Q80ZE5 354 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr493Q8VEW5 314 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Phf19Q9CXG9 578 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 BptfA2A654 3036 aaKnown RBP13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Usf3B2RUQ2 2221 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Ighv7-1A0A075B5S2 121 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm4175D3YTW8 314 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr739E9Q1P0 309 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Vmn1r114L7N226 321 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Vmn1r126L7N2C8 321 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 CrpP14847 225 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Tff1Q08423 87 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Fam160a2Q3U2I3 975 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr141Q60880 325 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm5771Q792Y9 245 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1299Q7TQX5 312 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1342Q8VFY3 315 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Egln1Q91YE3 400 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Mrpl30Q9D7N6 160 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Q9DAN9 164 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 Pex14Q9R0A0 376 aa13.91□□□□□ -0.18
Shh-201ENSMUST00000002708 TprF6ZDS4 2431 aaKnown RBP13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Irf2bp2E9Q1P8 570 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr178E9Q9T3 319 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm8677K9J7G9 307 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Cdk2P97377 346 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Htr2bQ02152 479 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm5615Q3UW02 101 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Rtp3Q5QGU6 474 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Tusc5Q8C838 173 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Msmo1Q9CRA4 293 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Igkv13-84A0A140T8N3 115 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Atpif1O35143 106 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Tnfsf8P32972 239 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Dvl1P51141 695 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Smug1Q6P5C5 279 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Lhfpl1Q80SV1 220 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Sirt7Q8BKJ9 402 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Q8CF25 301 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Vmn1r179Q8R2B4 323 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Mrpl27Q99N92 148 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Smdt1Q9DB10 107 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 PyyQ9EPS2 98 aa13.9□□□□□ -0.18
Shh-201ENSMUST00000002708 Zfhx4Q9JJN2 3550 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Igkv14-111A0A140T8P9 117 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm21616B6ZB74 166 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm42791D3YYB5 209 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Muc3E9PWP7 378 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Ifna7P06799 190 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Apobec4Q497M3 374 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Coq2Q66JT7 374 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Msl2Q69ZF8 577 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Q6PIU9 354 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Tmem56Q8CGF5 276 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Trav6d-5A0A075B6B9 112 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Jmjd7P0C872 316 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Rpl29P47915 160 aaKnown RBP13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Cyb561Q60720 250 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Smim12Q78RX3 92 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms