RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 A0A0B4J2A0 478 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 LEUTXA8MZ59 168 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 NPFFO15130 113 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 RAMP3O60896 148 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 CDS2O95674 445 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 LINC00614P0C842 121 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 SAA4P35542 130 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 RRAS2P62070 204 aaPredicted RBP6.38□□□□□ -1.39
SCARB2-220ENST00000640076 SRPXP78539 464 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MIDNQ504T8 468 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 OR2B11Q5JQS5 317 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 TPTE2P1Q5T6R2 138 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MINOS1Q5TGZ0 78 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 TCTEX1D1Q8N7M0 179 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 LRTM2Q8N967 370 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 COQ8AQ8NI60 647 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 RPEQ96AT9 228 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 NABP2Q9BQ15 211 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MED28Q9H204 178 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 PRELID3BQ9Y3B1 194 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MINOS1-NBL1R4GNA1 71 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 MTORP42345 2549 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV3OR16-10A0A075B7F0 116 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1W2PPI3 338 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 GAPDHP04406 335 aaKnown RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 GP9P14770 177 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 HLA-GP17693 338 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 HOXA1P49639 335 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 KRTAP1-1Q07627 177 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF816Q0VGE8 651 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 KLF17Q5JT82 389 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 LGI3Q8N145 548 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 TMEM56Q96MV1 263 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 HILPDAQ9Y5L2 63 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 TMEM56-RWDD3S4R434 201 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 TNCP24821 2201 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV1-3A0A0C4DH29 117 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 H0YJW9 148 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 RBFOX2O43251 390 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 NDUFA7O95182 113 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IGKV1-39P01597 117 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IGKV1D-39P04432 117 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 SULT1A3P0DMM9 295 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 SULT1A4P0DMN0 295 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 CXCL3P19876 107 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 KIR2DS2P43631 304 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 FCN2Q15485 313 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 BSXQ3C1V8 233 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 RUSC1-AS1Q66K80 236 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF695Q8IW36 515 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 PUSL1Q8N0Z8 303 aaKnown RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 OR11H7Q8NGC8 314 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 OR1L6Q8NGR2 347 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 RBPMSQ93062 196 aaKnown RBP6.37□□□□□ -1.39
SCARB2-220ENST00000640076 IL22RA2Q969J5 263 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 C18orf12Q96KH6 178 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 C12orf57Q99622 126 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 RSG1Q9BU20 258 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 MEGF9Q9H1U4 602 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 ZC4H2Q9NQZ6 224 aa6.37□□□□□ -1.39
SCARB2-220ENST00000640076 OOSP1A8MZH6 123 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 S1PR2O95136 353 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 FSHBP01225 129 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 APOA2P02652 100 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 IGKV1-16P04430 117 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 TRAPPC2P0DI81 140 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 TRAPPC2BP0DI82 140 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 PAX6P26367 422 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 LPAR6P43657 344 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 FGF8P55075 233 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-220ENST00000640076 PLP1P60201 277 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 RTL8BQ17RB0 113 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 AKIRIN2Q53H80 203 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 BRD3OSQ6XYD6 125 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 LYZL2Q7Z4W2 148 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 MOB3BQ86TA1 216 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 DYNAPQ8N1N2 210 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 SLC35G3Q8N808 338 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 OR4S2Q8NH73 311 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 RBMXL1Q96E39 390 aaKnown RBP6.36□□□□□ -1.39
SCARB2-220ENST00000640076 MALSU1Q96EH3 234 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF430Q9H8G1 570 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-220ENST00000640076 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 MLXQ9UH92 298 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 WASHC3Q9Y3C0 194 aa6.36□□□□□ -1.39
SCARB2-220ENST00000640076 IGHV3-72A0A0B4J1Y9 119 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 M0QZK8 103 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 RHODO00212 210 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 TIMM23O14925 209 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 ARPC5O15511 151 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 CD5LO43866 347 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 IGKV1-5P01602 117 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms