RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RNASE11	Q8TAA1	199 aa	Known RBP	10.86	□□□□□ -0.67
TARDBP-231	ENST00000639599	MRGPRF	Q96AM1	343 aa		10.86	□□□□□ -0.67
TARDBP-231	ENST00000639599	NARS2	Q96I59	477 aa	Known RBP	10.86	□□□□□ -0.67
TARDBP-231	ENST00000639599	SCPEP1	Q9HB40	452 aa		10.86	□□□□□ -0.67
TARDBP-231	ENST00000639599	COMMD3	Q9UBI1	195 aa		10.86	□□□□□ -0.67
TARDBP-231	ENST00000639599	IGHV3OR16-13	A0A075B7E8	117 aa		10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	IGHV3-74	A0A0B4J1X5	117 aa		10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599		F8W735	103 aa	Predicted RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	CA1	P00915	261 aa	Predicted RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	TGFBR1	P36897	503 aa		10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	RPS19	P39019	145 aa	Known RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	HOXA1	P49639	335 aa	Predicted RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	SUB1	P53999	127 aa	Known RBP eCLIP	10.85	□□□□□ -0.67	1e-11	■□□□□ 9.4
TARDBP-231	ENST00000639599	HSPE1	P61604	102 aa	Known RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	RBMS2	Q15434	407 aa	Known RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	TCF24	Q7RTU0	167 aa		10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	NXF2	Q9GZY0	626 aa	Known RBP	10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599	DNAH1	Q9P2D7	4330 aa		10.85	□□□□□ -0.67
TARDBP-231	ENST00000639599		A0A087WXM4	84 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	DBX1	A6NMT0	343 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599		I3L2K1	104 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	CORT	O00230	105 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	IFNA17	P01571	189 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	IGHV3-48	P01763	117 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	ZNF114	Q8NC26	417 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	OR11H2	Q8NH07	326 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	C11orf45	Q8TAV5	145 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	OR10C1	Q96KK4	312 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	RABAC1	Q9UI14	185 aa		10.84	□□□□□ -0.67
TARDBP-231	ENST00000639599	CSMD3	Q7Z407	3707 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599		A0A1W2PS18	150 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	FAM25A	B3EWG3	89 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	FAM25C	B3EWG5	89 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	FAM25G	B3EWG6	89 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	TMEM187	Q14656	261 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	TRIM16L	Q309B1	348 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	SPINK9	Q5DT21	86 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	ZNF600	Q6ZNG1	722 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	STH	Q8IWL8	128 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	GPX8	Q8TED1	209 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	SEC22A	Q96IW7	307 aa		10.83	□□□□□ -0.68
TARDBP-231	ENST00000639599	DFFB	O76075	338 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	APOA1	P02647	267 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	UCP3	P55916	312 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	ZNF124	Q15973	351 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	RNASE10	Q5GAN6	216 aa	Known RBP	10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	MZT2A	Q6P582	158 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	LYSMD2	Q8IV50	215 aa		10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	C11orf68	Q9H3H3	251 aa	Known RBP	10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
TARDBP-231	ENST00000639599	HYDIN	Q4G0P3	5121 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	IGHV3-66	A0A0C4DH42	116 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	TNFAIP8	O95379	198 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	NPPC	P23582	126 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	OPRK1	P41145	380 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	EIF2B2	P49770	351 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	DEFB131A	P59861	70 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	NANOS2	P60321	138 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	RNASE12	Q5GAN4	147 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	TOMM20L	Q6UXN7	152 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	CCDC71L	Q8N9Z2	235 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	ST8SIA2	Q92186	375 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	RRNAD1	Q96FB5	475 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	ZNF486	Q96H40	463 aa	Predicted RBP	10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	METTL26	Q96S19	204 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	MS4A6A	Q9H2W1	248 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599	COPZ2	Q9P299	210 aa		10.81	□□□□□ -0.68
TARDBP-231	ENST00000639599		M0QYG6	137 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	PIGP	P57054	158 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	LEMD1	Q68G75	181 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	LGALS9C	Q6DKI2	356 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	RPP25L	Q8N5L8	163 aa	Known RBP	10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	STXBP6	Q8NFX7	210 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	C2CD4C	Q8TF44	421 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	AP3S1	Q92572	193 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	TMEM230	Q96A57	120 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	YIPF6	Q96EC8	236 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	GRAMD2B	Q96HH9	432 aa		10.8	□□□□□ -0.68
TARDBP-231	ENST00000639599	TRAV2	A0A0B4J234	112 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	DEDD	O75618	318 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	IGKV1-39	P01597	117 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	IGKV1D-39	P04432	117 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	ZFAND1	Q8TCF1	268 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	ALMS1	Q8TCU4	4167 aa		10.79	□□□□□ -0.68
TARDBP-231	ENST00000639599	C3orf85	A0A1B0GTC6	90 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	DEFB4A	O15263	64 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	HPGDS	O60760	199 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	PI3	P19957	117 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	RORC	P51449	518 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	PPP5C	P53041	499 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	RND3	P61587	244 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	VBP1	P61758	197 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	NCS1	P62166	190 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	IZUMO4	Q1ZYL8	232 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	SCGB2B2	Q4G0G5	96 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	TMEM41B	Q5BJD5	291 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	FAM90A2P	Q658T7	463 aa		10.78	□□□□□ -0.68
TARDBP-231	ENST00000639599	ARRDC1	Q8N5I2	433 aa		10.78	□□□□□ -0.68

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