RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 ERHP84090 104 aaKnown RBP7.68□□□□□ -1.18
CLN3-261ENST00000637686 CD300CQ08708 224 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 KIAA0141Q14154 515 aaPredicted RBP7.68□□□□□ -1.18
CLN3-261ENST00000637686 TNXAQ16473 311 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 BSXQ3C1V8 233 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 LRRC37A5PQ49AS3 106 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 AKIRIN2Q53H80 203 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 Q5BKY6 102 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 ACOT7LQ6ZUV0 252 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 OR2C3Q8N628 320 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 INO80EQ8NBZ0 244 aaPredicted RBP7.68□□□□□ -1.18
CLN3-261ENST00000637686 OR11H4Q8NGC9 324 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 OR1L6Q8NGR2 347 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 SRSF12Q8WXF0 261 aaKnown RBP7.68□□□□□ -1.18
CLN3-261ENST00000637686 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
CLN3-261ENST00000637686 FXYD6-FXYD2A0A087WZ82 144 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 BRI3O95415 125 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 APELAP0DMC3 54 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 CDX1P47902 265 aaPredicted RBP7.67□□□□□ -1.18
CLN3-261ENST00000637686 HOXA1P49639 335 aaPredicted RBP7.67□□□□□ -1.18
CLN3-261ENST00000637686 RAB9AP51151 201 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 KLK9Q2XQG4 91 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 C2orf83Q53S99 150 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 PVRIGQ6DKI7 326 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 TMEM14EPQ6UXP3 125 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 ZNF491Q8N8L2 437 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 MYOZ3Q8TDC0 251 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 DCUN1D4Q92564 292 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 MS4A10Q96PG2 267 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 DUX3Q96PT4 197 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 HEYLQ9NQ87 328 aaPredicted RBP7.67□□□□□ -1.18
CLN3-261ENST00000637686 KLK9Q9UKQ9 250 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 MGAM2Q2M2H8 2515 aa7.67□□□□□ -1.18
CLN3-261ENST00000637686 IGLC7A0M8Q6 106 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 RNF222A6NCQ9 220 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 CGB1A6NKQ9 187 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 NPIPB5A8MRT5 1133 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 FNDC10F2Z333 226 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 SMLR1H3BR10 107 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 CCL24O00175 119 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 TAAR5O14804 337 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 TMEM50AO95807 157 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 CRYGCP07315 174 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 RPL12P30050 165 aaKnown RBP7.66□□□□□ -1.18
CLN3-261ENST00000637686 SUB1P53999 127 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLN3-261ENST00000637686 RAB11AP62491 216 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 DEFB136Q30KP8 78 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 C10orf55Q5SWW7 151 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 ASPHD1Q5U4P2 390 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 ETV3LQ6ZN32 361 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 STX12Q86Y82 276 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 KCNRGQ8N5I3 272 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 TMEM252Q8N6L7 170 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 SLC24A4Q8NFF2 622 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 C4orf3Q8WVX3 66 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 RAX2Q96IS3 184 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 UBE2E2Q96LR5 201 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 GGACTQ9BVM4 153 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 MFFQ9GZY8 342 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 MAGT1Q9H0U3 335 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 GNB4Q9HAV0 340 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 ZNF355PQ9NSJ1 428 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 PSENENQ9NZ42 101 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 STRAPQ9Y3F4 350 aaKnown RBP7.66□□□□□ -1.18
CLN3-261ENST00000637686 NBEAL1Q6ZS30 2694 aa7.66□□□□□ -1.18
CLN3-261ENST00000637686 A0A1B0GW64 132 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 G3V4G9 280 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 BOLA2-SMG1P6H3BVE0 249 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CORTO00230 105 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 ARPC5O15511 151 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CYB5BO43169 146 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 MYOD1P15172 320 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CTRB1P17538 263 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CD33P20138 364 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 NPY1RP25929 384 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 MYCNOSP40205 109 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 EIF2B2P49770 351 aaKnown RBP7.65□□□□□ -1.18
CLN3-261ENST00000637686 SULT1A1P50225 295 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CAV2P51636 162 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 HBG1P69891 147 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 HBG2P69892 147 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 ATP6V1FQ16864 119 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 CTRB2Q6GPI1 263 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 C1QL4Q86Z23 238 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 C9orf62Q8N4C0 152 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 OR1P1Q8NH06 330 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 RNASEH2CQ8TDP1 164 aaKnown RBP7.65□□□□□ -1.18
CLN3-261ENST00000637686 PINX1Q96BK5 328 aaKnown RBP7.65□□□□□ -1.18
CLN3-261ENST00000637686 OR5B12Q96R08 314 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 P2RX4Q99571 388 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 HSPB11Q9Y547 144 aa7.65□□□□□ -1.18
CLN3-261ENST00000637686 C15orf62A8K5M9 175 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 PMS2P5A8MQ11 134 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 E7EUB6 86 aa7.64□□□□□ -1.19
CLN3-261ENST00000637686 H3BUA1 57 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms