RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 LRTM2Q8N967 370 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 DLX4Q92988 240 aaPredicted RBP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 NEURL2Q9BR09 285 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 PLEKHA3Q9HB20 300 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 CACNG5Q9UF02 275 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 F11RQ9Y624 299 aaKnown RBP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 PIGBOS1A0A0B4J2F0 54 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 CYB5BO43169 146 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 WIPF1O43516 503 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 ADAP1O75689 374 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 IFNA17P01571 189 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 SULT1A3P0DMM9 295 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 SULT1A4P0DMN0 295 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 SPCS3P61009 180 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 ERHP84090 104 aaKnown RBP7.47□□□□□ -1.21
LINC00339-210ENST00000635675 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
LINC00339-210ENST00000635675 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
LINC00339-210ENST00000635675 SPINK9Q5DT21 86 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 FAM209BQ5JX69 171 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 SLC25A24Q6NUK1 477 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 OR1L6Q8NGR2 347 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 OR1P1Q8NH06 330 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 COQ8AQ8NI60 647 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 CXorf58Q96LI9 332 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 THYN1Q9P016 225 aa7.47□□□□□ -1.21
LINC00339-210ENST00000635675 TRBV7-1A0A0A6YYK4 115 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 C5orf51A6NDU8 294 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 MFSD2BA6NFX1 497 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 BMPR1BO00238 502 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 OVOL1O14753 267 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF502Q8TBZ5 544 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 VN1R17PQ8TDU5 208 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 MITD1Q8WV92 249 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 ST6GAL2Q96JF0 529 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 PDCD10Q9BUL8 212 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 GPR61Q9BZJ8 451 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.21
LINC00339-210ENST00000635675 S4R3C0 116 aa7.46□□□□□ -1.21
LINC00339-210ENST00000635675 A0A1B0GU03 582 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 SEC14L6B5MCN3 397 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 K7EIM0 57 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 PITX3O75364 302 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 IGHV3-23P01764 117 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 CLEC3BP05452 202 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 NKX2-5P52952 324 aaPredicted RBP7.45□□□□□ -1.22
LINC00339-210ENST00000635675 DEFA6Q01524 100 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 EGFEM1PQ0D2K5 195 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 PVRIGQ6DKI7 326 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 ACSM6Q6P461 480 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 CLEC19AQ6UXS0 136 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 SCARB1Q8WTV0 552 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 CACFD1Q9UGQ2 172 aa7.45□□□□□ -1.22
LINC00339-210ENST00000635675 MPTX1A8MV57 137 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 PPP5D1E7EU14 171 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 I3L2K1 104 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 GGCTO75223 188 aaKnown RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 NXPH3O95157 252 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 SCGB1D2O95969 90 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 RNASE2P10153 161 aaKnown RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 SLC25A6P12236 298 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 SNCAP37840 140 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 HOXA1P49639 335 aaPredicted RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 EIF2B2P49770 351 aaKnown RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 KRTAP10-11P60412 298 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 RPEL1Q2QD12 228 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 BSXQ3C1V8 233 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 LRRC37A5PQ49AS3 106 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 GGNBP1Q5YKI7 109 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 GSG1LQ6UXU4 331 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 ENY2Q9NPA8 101 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 HSPB7Q9UBY9 170 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 TMED3Q9Y3Q3 217 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 IGHV3-21A0A0B4J1V1 117 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 F8W735 103 aaPredicted RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 OR2C1O95371 312 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 ARL3P36405 182 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 INSL3P51460 131 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 SUB1P53999 127 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 H2BFSP57053 126 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 TNFRSF9Q07011 255 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 ZFP69Q49AA0 526 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 IL34Q6ZMJ4 242 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 GPHB5Q86YW7 130 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 OR9G4Q8NGQ1 327 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 HEYLQ9NQ87 328 aaPredicted RBP7.44□□□□□ -1.22
LINC00339-210ENST00000635675 C21orf62Q9NYP8 219 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 GSKIPQ9P0R6 139 aa7.44□□□□□ -1.22
LINC00339-210ENST00000635675 CEBPZOSA8MTT3 80 aa7.43□□□□□ -1.22
LINC00339-210ENST00000635675 MT-CO2P00403 227 aa7.43□□□□□ -1.22
LINC00339-210ENST00000635675 IFNA21P01568 189 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms