RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
TARDBP-227ENST00000622057 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 SMIM31A0A1B0GVY4 71 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 DNASE2O00115 360 aaPredicted RBP6.85□□□□□ -1.31
TARDBP-227ENST00000622057 ST8SIA3O43173 380 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 IFNA4P05014 189 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 HSPE1P61604 102 aaKnown RBP6.85□□□□□ -1.31
TARDBP-227ENST00000622057 RPL11P62913 178 aaKnown RBP6.85□□□□□ -1.31
TARDBP-227ENST00000622057 SPINK9Q5DT21 86 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 FAM90A2PQ658T7 463 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 TOMM20LQ6UXN7 152 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 TCF24Q7RTU0 167 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 OR11H2Q8NH07 326 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 C11orf45Q8TAV5 145 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 SEC22AQ96IW7 307 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 COMMD3Q9UBI1 195 aa6.85□□□□□ -1.31
TARDBP-227ENST00000622057 DEFB4AO15263 64 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 CA1P00915 261 aaPredicted RBP6.84□□□□□ -1.31
TARDBP-227ENST00000622057 IGKV1-39P01597 117 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 APOHP02749 345 aaPredicted RBP6.84□□□□□ -1.31
TARDBP-227ENST00000622057 IGKV1D-39P04432 117 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 DEFB131AP59861 70 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 PRCDQ00LT1 54 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 RBMS2Q15434 407 aaKnown RBP6.84□□□□□ -1.31
TARDBP-227ENST00000622057 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 LEMD1Q68G75 181 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 LGALS9CQ6DKI2 356 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 SNX29P2Q8IUI4 249 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 LILRB2Q8N423 598 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 DUSP18Q8NEJ0 188 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 GPX8Q8TED1 209 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 MRGPRFQ96AM1 343 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 GINS3Q9BRX5 216 aa6.84□□□□□ -1.31
TARDBP-227ENST00000622057 DFFBO76075 338 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 SNCAP37840 140 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 NPBWR1P48145 328 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 TMEM187Q14656 261 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 KCTD21Q4G0X4 260 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 ZNF114Q8NC26 417 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 YIPF6Q96EC8 236 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 MFFQ9GZY8 342 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 MS4A6AQ9H2W1 248 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 FAM212BQ9NTI7 297 aaPredicted RBP6.83□□□□□ -1.32
TARDBP-227ENST00000622057 PUS1Q9Y606 427 aaKnown RBP eCLIP6.83□□□□□ -1.32
TARDBP-227ENST00000622057 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
TARDBP-227ENST00000622057 M0QYG6 137 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 TMEM50AO95807 157 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 IFNA17P01571 189 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 CD5P06127 495 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 PGAM2P15259 253 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 UCP3P55916 312 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 MLANAQ16655 118 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
TARDBP-227ENST00000622057 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 STHQ8IWL8 128 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 FAM24BQ8N5W8 94 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 PDCD10Q9BUL8 212 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 VSIRQ9H7M9 311 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 RABAC1Q9UI14 185 aa6.82□□□□□ -1.32
TARDBP-227ENST00000622057 IGLL5B9A064 214 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 HPGDSO60760 199 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 PI3P19957 117 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 NPPCP23582 126 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 RCVRNP35243 200 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 ETV6P41212 452 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 AKR1C2P52895 323 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 SUB1P53999 127 aaKnown RBP eCLIP6.81□□□□□ -1.321e-11■□□□□ 9.4
TARDBP-227ENST00000622057 SLC35G3Q8N808 338 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 TMEM230Q96A57 120 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 KRTAP17-1Q9BYP8 105 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
TARDBP-227ENST00000622057 SCPEP1Q9HB40 452 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 VCX3AQ9NNX9 186 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 ENY2Q9NPA8 101 aa6.81□□□□□ -1.32
TARDBP-227ENST00000622057 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 A0A087WXM4 84 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 A0A0B4J293 547 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 A0A1B0GU03 582 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 A0A1W2PS18 150 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 FAM25AB3EWG3 89 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 FAM25CB3EWG5 89 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 FAM25GB3EWG6 89 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 APOA1P02647 267 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 ELK1P19419 428 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 OPRK1P41145 380 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 HOXA1P49639 335 aaPredicted RBP6.8□□□□□ -1.32
TARDBP-227ENST00000622057 PPP5CP53041 499 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 PIGPP57054 158 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 VBP1P61758 197 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 NCS1P62166 190 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 TRIM16LQ309B1 348 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 SP6Q3SY56 376 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 STXBP6Q8NFX7 210 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 TP53RKQ96S44 253 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 TMEM231Q9H6L2 316 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms