RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 MT-CO2P00403 227 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 LCN12Q6JVE5 192 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 SLC35G3Q8N808 338 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
LHX1-202ENST00000616237 CACNG5Q9UF02 275 aa12.85□□□□□ -0.35
LHX1-202ENST00000616237 CTSGP08311 255 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 RNASE2P10153 161 aaKnown RBP12.84□□□□□ -0.35
LHX1-202ENST00000616237 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 UXS1Q8NBZ7 420 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 OR2K2Q8NGT1 345 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 TMEM190Q8WZ59 177 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 IL22RA2Q969J5 263 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 ATP6V0BQ99437 205 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
LHX1-202ENST00000616237 NDUFA13Q9P0J0 144 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 MLXQ9UH92 298 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
LHX1-202ENST00000616237 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
LHX1-202ENST00000616237 Q56UQ5 140 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
LHX1-202ENST00000616237 SPSB3Q6PJ21 355 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 LYZL2Q7Z4W2 148 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 TMED4Q7Z7H5 227 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 OR52E5Q8NH55 327 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 DEDD2Q8WXF8 326 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
LHX1-202ENST00000616237 PDCD10Q9BUL8 212 aa12.83□□□□□ -0.36
LHX1-202ENST00000616237 IGHV4-30-4P0DP06 118 aa12.82□□□□□ -0.36
LHX1-202ENST00000616237 HOXA1P49639 335 aaPredicted RBP12.82□□□□□ -0.36
LHX1-202ENST00000616237 SPCS3P61009 180 aa12.82□□□□□ -0.36
LHX1-202ENST00000616237 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
LHX1-202ENST00000616237 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
LHX1-202ENST00000616237 WDR89Q96FK6 387 aaPredicted RBP12.82□□□□□ -0.36
LHX1-202ENST00000616237 C19orf73Q9NVV2 129 aa12.82□□□□□ -0.36
LHX1-202ENST00000616237 TECRQ9NZ01 308 aaKnown RBP12.82□□□□□ -0.36
LHX1-202ENST00000616237 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 NXPH3O95157 252 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 SNCAP37840 140 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 CCR6P51684 374 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 MFAP4P55083 255 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 ELLP55199 621 aaPredicted RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 SLC25A21Q9BQT8 299 aaPredicted RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 STAB2Q8WWQ8 2551 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 A8MZ25 164 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 NDUFA4O00483 81 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 CD7P09564 240 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 MLANAQ16655 118 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 TMEM128Q5BJH2 165 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 BTNL8Q6UX41 500 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 TXN2Q99757 166 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 FNDC4Q9H6D8 234 aaPredicted RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 MRPL27Q9P0M9 148 aaKnown RBP12.81□□□□□ -0.36
LHX1-202ENST00000616237 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
LHX1-202ENST00000616237 SULT1A3P0DMM9 295 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 SULT1A4P0DMN0 295 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 ANKRD55Q3KP44 614 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 TRIQKQ629K1 86 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 LGI3Q8N145 548 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 TMEM170AQ8WVE7 144 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 MARC2Q969Z3 335 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 ENY2Q9NPA8 101 aa12.8□□□□□ -0.36
LHX1-202ENST00000616237 TENM3Q9P273 2699 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
LHX1-202ENST00000616237 ANXA3P12429 323 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 BTCP35070 178 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
LHX1-202ENST00000616237 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
LHX1-202ENST00000616237 GAR1Q9NY12 217 aaKnown RBP12.79□□□□□ -0.36
LHX1-202ENST00000616237 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
LHX1-202ENST00000616237 SCAF4O95104 1147 aaKnown RBP12.78□□□□□ -0.36
LHX1-202ENST00000616237 IL7P13232 177 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
LHX1-202ENST00000616237 CD81P60033 236 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 RBMS2Q15434 407 aaKnown RBP12.78□□□□□ -0.36
LHX1-202ENST00000616237 LRTM2Q8N967 370 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 NEURL2Q9BR09 285 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 HEYLQ9NQ87 328 aaPredicted RBP12.78□□□□□ -0.36
LHX1-202ENST00000616237 U3KQK5 164 aa12.78□□□□□ -0.36
LHX1-202ENST00000616237 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 K7EMT4 169 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 CORTO00230 105 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 GNG7O60262 68 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms