RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MSMBP08118 114 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 IGFBP2P18065 325 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 AGAP20933 346 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 PRTN3P24158 256 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 SMAGPQ0VAQ4 97 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 MRPL54Q6P161 138 aaKnown RBP7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 TMEM144Q7Z5S9 345 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 COQ2Q96H96 371 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 ABCA4P78363 2273 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3OR16-13A0A075B7E8 117 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3-74A0A0B4J1X5 117 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 TCRBV4S1A1TA0A5B7 111 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 M0R2Z0 102 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 GPX1P07203 203 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 GCHFRP30047 84 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 RHOGP84095 191 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 COTL1Q14019 142 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 PVRIGQ6DKI7 326 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 TUBA4BQ9H853 241 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 POLEQ07864 2286 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 BDP1A6H8Y1 2624 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 TRAV41A0A0B4J266 112 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 DANCRP0C864 163 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 H3BUX3 64 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 UQCRFS1P47985 274 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 HIST1H1AQ02539 215 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 FAM71F2Q6NXP2 309 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 ELOBQ15370 118 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF600Q6ZNG1 722 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 OR52E5Q8NH55 327 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 SH3BGRL3Q9H299 93 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF257Q9Y2Q1 563 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 BUB1B-PAK6H3BSN5 160 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 CX3CL1P78423 397 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 QRFPP83859 136 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 PRSS8Q16651 343 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 BRD3OSQ6XYD6 125 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 Q6ZS49 121 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 AURKAIP1Q9NWT8 199 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3-49A0A0A0MS15 119 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 CD55P08174 381 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 SCGB1C2P0DMR2 95 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 LHFPL1Q86WI0 220 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 LRTM2Q8N967 370 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 GPR82Q96P67 336 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 RSPO3Q9BXY4 272 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 GSX1Q9H4S2 264 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 IGLV3-9A0A075B6K5 115 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 H3BTX0 84 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 AMY1AP04745 511 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 NBEAP1P0C6P0 100 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 SRD5A1P18405 259 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 CD69Q07108 199 aa7.78□□□□□ -1.16
CLTCL1-208ENST00000615606 TMEM97Q5BJF2 176 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 OR11H4Q8NGC9 324 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 DMRTA2Q96SC8 542 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 TMEM191AQ9H0A3 160 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 DKK4Q9UBT3 224 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 PSMB11A5LHX3 300 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 PRSS1P07477 247 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 C2orf68Q2NKX9 166 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 Q6ZN92 141 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 GOLT1AQ6ZVE7 132 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 HIST1H2BAQ96A08 127 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 SCN8AQ9UQD0 1980 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 AKAP6Q13023 2319 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 SNURFLB1AK76 121 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 CRYBB3P26998 211 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 BTCP35070 178 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 IER3P46695 156 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 TFF3Q07654 80 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 Q5BKY6 102 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 Q6ZR03 302 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 PKDREJQ9NTG1 2253 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 NTF4P34130 210 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 TWIST1Q15672 202 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 TMEM116Q8NCL8 245 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 Q96MF0 132 aa7.77□□□□□ -1.17
CLTCL1-208ENST00000615606 ITGB1BP1O14713 200 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 ID3Q02535 119 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 ICAM4Q14773 271 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 RPRMQ9NS64 109 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 PLXND1Q9Y4D7 1925 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 OBSL1O75147 1896 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 PHF3Q92576 2039 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 IGHV3-66A0A0C4DH42 116 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 MPTX1A8MV57 137 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 HLA-DRB1P01911 266 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 ANOS1P23352 680 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 MFAP2P55001 183 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 C5orf64Q2M2E5 130 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms