RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 BSCL2Q96G97 398 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 TXN2Q99757 166 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
SHKBP1-212ENST00000596163 A0A1B0GU03 582 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 CEBPZOSA8MTT3 80 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 K7EIL1 84 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 K7EIM0 57 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 TGOLN2O43493 480 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 HLA-AP01891 365 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 MFAP4P55083 255 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 Q56UQ5 140 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 NMSQ5H8A3 153 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 WDR12Q9GZL7 423 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-212ENST00000596163 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 LYRM1O43325 122 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 CSN3P07498 182 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 HTR2BP41595 481 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 IL34Q6ZMJ4 242 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 NOXA1Q86UR1 476 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
SHKBP1-212ENST00000596163 OR2T8A6NH00 312 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 I3L2K1 104 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 MT-CO2P00403 227 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 ZNF846Q147U1 533 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 ANKRD55Q3KP44 614 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 UBAC2Q8NBM4 344 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 OR2K2Q8NGT1 345 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 OR1S1Q8NH92 325 aa13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-212ENST00000596163 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 PLA2G10O15496 165 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 SLC25A6P12236 298 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 SPNP16150 400 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 NPBWR1P48145 328 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 DYNLRB2Q8TF09 96 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 PRR25Q96S07 402 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 ZC4H2Q9NQZ6 224 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 UFC1Q9Y3C8 167 aa13.16□□□□□ -0.3
SHKBP1-212ENST00000596163 OR4E1P0C645 316 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 BTCP35070 178 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 ELLP55199 621 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 TNFRSF9Q07011 255 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 MZT2BQ6NZ67 158 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 MARC2Q969Z3 335 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 ZNF436Q9C0F3 470 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 TECRQ9NZ01 308 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 HSPB7Q9UBY9 170 aa13.15□□□□□ -0.3
SHKBP1-212ENST00000596163 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 C2orf70A6NJV1 201 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 A8MWP6 167 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 NDUFA4O00483 81 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 GNG7O60262 68 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 FOLR2P14207 255 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 GP9P14770 177 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 ATP5IP56385 69 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 U3KQ87 197 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 DNAH3Q8TD57 4116 aa13.14□□□□□ -0.31
SHKBP1-212ENST00000596163 FAM90A26D6RGX4 464 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 MED6O75586 246 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 NXPH3O95157 252 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 IFNA21P01568 189 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 TCRBP04435 133 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 CTSGP08311 255 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 HOXB5P09067 269 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 CBLN1P23435 193 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 OPRK1P41145 380 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 DHRS2Q13268 280 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 DTD1Q8TEA8 209 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 MRPL27Q9P0M9 148 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-212ENST00000596163 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms