RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KRTAP17-1Q9BYP8 105 aa10.39□□□□□ -0.75
ERCC1-205ENST00000587888 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
ERCC1-205ENST00000587888 DNASE2O00115 360 aaPredicted RBP10.38□□□□□ -0.75
ERCC1-205ENST00000587888 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
ERCC1-205ENST00000587888 EIF4EP06730 217 aaKnown RBP10.38□□□□□ -0.75
ERCC1-205ENST00000587888 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
ERCC1-205ENST00000587888 RBMS2Q15434 407 aaKnown RBP10.38□□□□□ -0.75
ERCC1-205ENST00000587888 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
ERCC1-205ENST00000587888 LILRB2Q8N423 598 aa10.38□□□□□ -0.75
ERCC1-205ENST00000587888 MRGPRFQ96AM1 343 aa10.38□□□□□ -0.75
ERCC1-205ENST00000587888 ST8SIA3O43173 380 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 DFFBO76075 338 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 CA1P00915 261 aaPredicted RBP10.37□□□□□ -0.75
ERCC1-205ENST00000587888 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 HSPE1P61604 102 aaKnown RBP10.37□□□□□ -0.75
ERCC1-205ENST00000587888 ERHP84090 104 aaKnown RBP10.37□□□□□ -0.75
ERCC1-205ENST00000587888 PRCDQ00LT1 54 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 IZUMO4Q1ZYL8 232 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 LEMD1Q68G75 181 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 ST8SIA2Q92186 375 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
ERCC1-205ENST00000587888 DEFB131AP59861 70 aa10.36□□□□□ -0.75
ERCC1-205ENST00000587888 TMEM187Q14656 261 aa10.36□□□□□ -0.75
ERCC1-205ENST00000587888 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
ERCC1-205ENST00000587888 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
ERCC1-205ENST00000587888 FAM212BQ9NTI7 297 aaPredicted RBP10.36□□□□□ -0.75
ERCC1-205ENST00000587888 PLECQ15149 4684 aaKnown RBP10.36□□□□□ -0.75
ERCC1-205ENST00000587888 SMIM31A0A1B0GVY4 71 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 SNCAP37840 140 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 NPBWR1P48145 328 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PRR20EP86478 221 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PRR20CP86479 221 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PRR20DP86480 221 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PRR20BP86481 221 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PRR20AP86496 221 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 SNX29P2Q8IUI4 249 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 FAM24BQ8N5W8 94 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 ZNF114Q8NC26 417 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 GPX8Q8TED1 209 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 COMMD3Q9UBI1 195 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 RABAC1Q9UI14 185 aa10.35□□□□□ -0.75
ERCC1-205ENST00000587888 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
ERCC1-205ENST00000587888 M0QYG6 137 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 TMEM50AO95807 157 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 CD5P06127 495 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 UCP3P55916 312 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 ZNF600Q6ZNG1 722 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 YIPF6Q96EC8 236 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
ERCC1-205ENST00000587888 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
ERCC1-205ENST00000587888 A0A1B0GU03 582 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 IGLL5B9A064 214 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 IFNA17P01571 189 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 PGAM2P15259 253 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 PI3P19957 117 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 NPPCP23582 126 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 MLANAQ16655 118 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 KCTD21Q4G0X4 260 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 STHQ8IWL8 128 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
ERCC1-205ENST00000587888 RCVRNP35243 200 aa10.32□□□□□ -0.76
ERCC1-205ENST00000587888 ETV6P41212 452 aa10.32□□□□□ -0.76
ERCC1-205ENST00000587888 RNASE12Q5GAN4 147 aaKnown RBP10.32□□□□□ -0.76
ERCC1-205ENST00000587888 SCPEP1Q9HB40 452 aa10.32□□□□□ -0.76
ERCC1-205ENST00000587888 A0A0B4J293 547 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 ELK1P19419 428 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 PPP5CP53041 499 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 SUB1P53999 127 aaKnown RBP eCLIP10.31□□□□□ -0.76
ERCC1-205ENST00000587888 STXBP6Q8NFX7 210 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 TMEM230Q96A57 120 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 TMEM231Q9H6L2 316 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
ERCC1-205ENST00000587888 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 A0A1W2PS18 150 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 HPGDSO60760 199 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 APOA1P02647 267 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
ERCC1-205ENST00000587888 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
ERCC1-205ENST00000587888 HOXA1P49639 335 aaPredicted RBP10.3□□□□□ -0.76
ERCC1-205ENST00000587888 AKR1C2P52895 323 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 PIGPP57054 158 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
ERCC1-205ENST00000587888 SP6Q3SY56 376 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 METTL26Q96S19 204 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
ERCC1-205ENST00000587888 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
ERCC1-205ENST00000587888 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
ERCC1-205ENST00000587888 C3orf85A0A1B0GTC6 90 aa10.29□□□□□ -0.76
ERCC1-205ENST00000587888 FAM25AB3EWG3 89 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms