RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	C11orf94	C9JXX5	98 aa		16.02	■□□□□ 0.16
PLEKHM1-214	ENST00000586084	PMP2	P02689	132 aa		16.02	■□□□□ 0.16
PLEKHM1-214	ENST00000586084	S100G	P29377	79 aa		16.02	■□□□□ 0.16
PLEKHM1-214	ENST00000586084	ZNF114	Q8NC26	417 aa		16.02	■□□□□ 0.16
PLEKHM1-214	ENST00000586084	FAM212B	Q9NTI7	297 aa	Predicted RBP	16.02	■□□□□ 0.16
PLEKHM1-214	ENST00000586084	IGHV3OR16-13	A0A075B7E8	117 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	IGHV3-74	A0A0B4J1X5	117 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	DBX1	A6NMT0	343 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	DNASE2	O00115	360 aa	Predicted RBP	16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	DEFB4A	O15263	64 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	MT-CO2	P00403	227 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	OR6F1	Q8NGZ6	308 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	OR4A16	Q8NH70	328 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	ANAPC10	Q9UM13	185 aa		16.01	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	TRAV2	A0A0B4J234	112 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	ST8SIA3	O43173	380 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	H2BFWT	Q7Z2G1	175 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	CROCCP3	Q8IVE0	287 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	PINX1	Q96BK5	328 aa	Known RBP	16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	FXYD6	Q9H0Q3	95 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	MS4A6A	Q9H2W1	248 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	HRH4	Q9H3N8	390 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	VSIR	Q9H7M9	311 aa		16	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	IGLL5	B9A064	214 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	DEFB131A	P59861	70 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	RPL11	P62913	178 aa	Known RBP	15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	PRCD	Q00LT1	54 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	LPCAT3	Q6P1A2	487 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	STH	Q8IWL8	128 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	DUSP18	Q8NEJ0	188 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	ST8SIA2	Q92186	375 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	APLN	Q9ULZ1	77 aa		15.99	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	IGHV3-48	P01763	117 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	NAT1	P18440	290 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	NPBWR1	P48145	328 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	LSM3	P62310	102 aa	Known RBP	15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	ERH	P84090	104 aa	Known RBP	15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	PHLDA2	Q53GA4	152 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	TMEM41B	Q5BJD5	291 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	UBE2NL	Q5JXB2	153 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	TMEM69	Q5SWH9	247 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	GPR107	Q5VW38	600 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	LEMD1	Q68G75	181 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	TOMM20L	Q6UXN7	152 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	TMEM231	Q9H6L2	316 aa		15.98	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	HSPE1	P61604	102 aa	Known RBP	15.97	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	CENPS	Q8N2Z9	138 aa		15.97	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	SEC22A	Q96IW7	307 aa		15.97	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	GABARAP	O95166	117 aa		15.96	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	ZNF600	Q6ZNG1	722 aa		15.96	■□□□□ 0.15
PLEKHM1-214	ENST00000586084		Q8NAQ8	132 aa		15.96	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	BCL7B	Q9BQE9	202 aa		15.96	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	PUS1	Q9Y606	427 aa	Known RBP eCLIP	15.96	■□□□□ 0.15
PLEKHM1-214	ENST00000586084	NOL3	O60936	208 aa	Known RBP	15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	APOH	P02749	345 aa	Predicted RBP	15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	PRSS3	P35030	304 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	HRH1	P35367	487 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TMBIM6	P55061	237 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TAS2R20	P59543	309 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TSPAN5	P62079	268 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TBC1D26	Q86UD7	250 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RAB2B	Q8WUD1	216 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	ZFAND3	Q9H8U3	227 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RABAC1	Q9UI14	185 aa		15.95	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	IGHV3-66	A0A0C4DH42	116 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084		A0A1W2PS18	150 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	MIF	P14174	115 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	SNCA	P37840	140 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	VBP1	P61758	197 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	CTF1	Q16619	201 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	MORN3	Q6PF18	240 aa	Predicted RBP	15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	CLVS1	Q8IUQ0	354 aa	Predicted RBP	15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	LILRB2	Q8N423	598 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	SAMD12	Q8N8I0	201 aa		15.94	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	AGRN	O00468	2067 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	HERC2	O95714	4834 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	SPP1	P10451	314 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	HLA-DMA	P28067	261 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RPS19	P39019	145 aa	Known RBP	15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	NCS1	P62166	190 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	LINC00336	Q6ZUF6	198 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	LYSMD2	Q8IV50	215 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	FAM24B	Q8N5W8	94 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	MRGPRF	Q96AM1	343 aa		15.93	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TRAV10	A0A0B4J240	114 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	IGHV4-28	A0A0C4DH34	117 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	IGKV1-39	P01597	117 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	IGKV1D-39	P04432	117 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	NPPC	P23582	126 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	HLA-DMB	P28068	263 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TRPT1	Q86TN4	253 aa	Known RBP	15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	GRAMD2B	Q96HH9	432 aa		15.92	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	CORT	O00230	105 aa		15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TMEM50A	O95807	157 aa		15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RBMY1A1	P0DJD3	496 aa	Known RBP	15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RBMY1C	P0DJD4	496 aa		15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	TGFBR1	P36897	503 aa		15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	SUB1	P53999	127 aa	Known RBP eCLIP	15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	RBMY1F	Q15415	496 aa	Known RBP	15.91	■□□□□ 0.14
PLEKHM1-214	ENST00000586084	NAA50	Q9GZZ1	169 aa	Known RBP	15.91	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms