RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		U3KQE9	123 aa		3.23	□□□□□ -1.89
PPP4R1-209	ENST00000578329		X6R8D5	127 aa		3.23	□□□□□ -1.89
PPP4R1-209	ENST00000578329	ELOA3C	A0A087WX78	387 aa	Predicted RBP	3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	IGHV3-66	A0A0C4DH42	116 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	C15orf62	A8K5M9	175 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	INS-IGF2	F8WCM5	200 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	NUPL2	O15504	423 aa	Known RBP	3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	CREBL2	O60519	120 aa	Predicted RBP	3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	HPGDS	O60760	199 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	LY6G6C	O95867	125 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	MT-CO2	P00403	227 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	BMI1	P35226	326 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	PPP5C	P53041	499 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	UCP3	P55916	312 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	ARPC4	P59998	168 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	DEFB1	P60022	68 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	PRCD	Q00LT1	54 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	CBX3	Q13185	183 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	CTF1	Q16619	201 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	UBE2NL	Q5JXB2	153 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	SLC16A13	Q7RTY0	426 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	TBC1D26	Q86UD7	250 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	GBGT1	Q8N5D6	347 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	SAMD12	Q8N8I0	201 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	OR1P1	Q8NH06	330 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	CD300LF	Q8TDQ1	290 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	DCANP1	Q8TF63	244 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	LSM10	Q969L4	123 aa	Known RBP	3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	SLC25A46	Q96AG3	418 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	ATP6V0B	Q99437	205 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	FUNDC2	Q9BWH2	189 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	COMMD5	Q9GZQ3	224 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	KLK11	Q9UBX7	282 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	CELA1	Q9UNI1	258 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	UFC1	Q9Y3C8	167 aa		3.22	□□□□□ -1.89
PPP4R1-209	ENST00000578329	IGKV3-7	A0A075B6H7	116 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DPPA5	A6NC42	116 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CXorf65	A6NEN9	183 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	KNCN	A6PVL3	124 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329		K7EQG2	157 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	GPR31	O00270	319 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ST8SIA3	O43173	380 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SCGN	O76038	276 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DFFB	O76075	338 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	JTB	O76095	146 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM50A	O95807	157 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CD74	P04233	296 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DEFA4	P12838	97 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CBX5	P45973	191 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TFPI2	P48307	235 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RND3	P61587	244 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	HSPE1	P61604	102 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	VBP1	P61758	197 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CATR1	Q13166	79 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RBMS2	Q15434	407 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SP6	Q3SY56	376 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	LEMD1	Q68G75	181 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	LGALS9C	Q6DKI2	356 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	FAAP20	Q6NZ36	180 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TRPT1	Q86TN4	253 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM116	Q8NCL8	245 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DMBX1	Q8NFW5	382 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	OR52I2	Q8NH67	350 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM230	Q96A57	120 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	GALNT14	Q96FL9	552 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	C20orf24	Q9BUV8	137 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	HINT2	Q9BX68	163 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	MS4A6A	Q9H2W1	248 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	C11orf68	Q9H3H3	251 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DIABLO	Q9NR28	239 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	PRR13	Q9NZ81	148 aa		3.21	□□□□□ -1.9
PPP4R1-209	ENST00000578329	IGKV1D-37	A0A075B6S9	117 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	IGHV4-28	A0A0C4DH34	117 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	NUPR2	A6NF83	97 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	UBE2C	O00762	179 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RTL8C	O15255	209 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DHFR	P00374	187 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	APOA1	P02647	267 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CD3D	P04234	171 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	IGLC1	P0CG04	106 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	UCP1	P25874	307 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	CRYBB3	P26998	211 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	PRSS3	P35030	304 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	ETV6	P41212	452 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	DEFB131A	P59861	70 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	HERV-K104	P61576	105 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	USF2	Q15853	346 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TIGIT	Q495A1	244 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329		Q56UQ5	140 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RNASE12	Q5GAN4	147 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TMEM69	Q5SWH9	247 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	THOC7	Q6I9Y2	204 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	TCF24	Q7RTU0	167 aa		3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-209	ENST00000578329	SNX29P2	Q8IUI4	249 aa		3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms