RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 OPN1MWP04001 364 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 OPN1MW2P0DN77 364 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 OPN1MW3P0DN78 364 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 CTRB1P17538 263 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 HTR2BP41595 481 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 P2RY1P47900 373 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 GNB1P62873 340 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
COPS3-215ENST00000578317 NDPQ00604 133 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 WT1-ASQ06250 92 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 LRRC37A5PQ49AS3 106 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 C10orf55Q5SWW7 151 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 CTRB2Q6GPI1 263 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 SLC35E3Q7Z769 313 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 NOXA1Q86UR1 476 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 LURAP1LQ8IV03 231 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 TTC9CQ8N5M4 171 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 ZNF114Q8NC26 417 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 OR10W1Q8NGF6 305 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 ENY2Q9NPA8 101 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 TNFRSF19Q9NS68 423 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 OR5AC2Q9NZP5 309 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 TNCP24821 2201 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 LINC01548A6NM66 108 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 NPIPB5A8MRT5 1133 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 PAX4O43316 350 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 OR13C7P0DN81 318 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 SUB1P53999 127 aaKnown RBP eCLIP6.28□□□□□ -1.42e-14■■■■■ 68.6
COPS3-215ENST00000578317 S100A10P60903 97 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 RPL23AP62750 156 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 C2orf83Q53S99 150 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 ASPHD1Q5U4P2 390 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 ZNF546Q86UE3 836 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 LFNGQ8NES3 379 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 OR1P1Q8NH06 330 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 HYLS1Q96M11 299 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 HINT2Q9BX68 163 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 GON7Q9BXV9 100 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 ZNF702PQ9H963 129 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 LYRM2Q9NU23 88 aaPredicted RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 PSENENQ9NZ42 101 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 FBXO7Q9Y3I1 522 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 LSM5Q9Y4Y9 91 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 JMJD1CQ15652 2540 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 SETD2Q9BYW2 2564 aaPredicted RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 SH2D7A6NKC9 451 aaPredicted RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 L7N2F9 121 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 ATP6V0E1O15342 81 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 SSSCA1O60232 199 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 SCAF4O95104 1147 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 NXPH3O95157 252 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 AREGP15514 252 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 PPIFP30405 207 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 SNCAP37840 140 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 HOXA1P49639 335 aaPredicted RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 VAMP2P63027 116 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 CD300CQ08708 224 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 OR11H4Q8NGC9 324 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 GRPEL2Q8TAA5 225 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 P2RX4Q99571 388 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 FAM103A1Q9BTL3 118 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 SLC25A31Q9H0C2 315 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 MBD2Q9UBB5 411 aa6.28□□□□□ -1.4
COPS3-215ENST00000578317 STRAPQ9Y3F4 350 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 F11RQ9Y624 299 aaKnown RBP6.28□□□□□ -1.4
COPS3-215ENST00000578317 TRAV41A0A0B4J266 112 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 TMEM89A2RUT3 159 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 C15orf62A8K5M9 175 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 SMLR1H3BR10 107 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 CYB5BO43169 146 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 NDUFA7O95182 113 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 IFNA10P01566 189 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 CRYBA1P05813 215 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 RNASE2P10153 161 aaKnown RBP6.27□□□□□ -1.41
COPS3-215ENST00000578317 IAPPP10997 89 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 RAB11AP62491 216 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 CFHR3Q02985 330 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 BAXQ07812 192 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 ZFP69Q49AA0 526 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 SPINK9Q5DT21 86 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 C9orf152Q5JTZ5 239 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 SPANXN5Q5MJ07 72 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 Q6ZSV7 163 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 ACOT7LQ6ZUV0 252 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 CCDC28AQ8IWP9 274 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 STPG2Q8N412 459 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 TMEM252Q8N6L7 170 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 INO80EQ8NBZ0 244 aaPredicted RBP6.27□□□□□ -1.41
COPS3-215ENST00000578317 SLC24A4Q8NFF2 622 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.41
COPS3-215ENST00000578317 RNASEH2CQ8TDP1 164 aaKnown RBP6.27□□□□□ -1.41
COPS3-215ENST00000578317 TMEM170AQ8WVE7 144 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 PARP11Q9NR21 331 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 SERTAD4Q9NUC0 356 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms