RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 MARC2Q969Z3 335 aa10.57□□□□□ -0.72
GGA3-203ENST00000577435 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
GGA3-203ENST00000577435 ZC4H2Q9NQZ6 224 aa10.57□□□□□ -0.72
GGA3-203ENST00000577435 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
GGA3-203ENST00000577435 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 ZNF785A8K8V0 405 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 CTSGP08311 255 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 AKR1C4P17516 323 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 ADMP35318 185 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 SNCAP37840 140 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.72
GGA3-203ENST00000577435 MFAP4P55083 255 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 SRPXP78539 464 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
GGA3-203ENST00000577435 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
GGA3-203ENST00000577435 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 NDUFA4O00483 81 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 MT-CO2P00403 227 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
GGA3-203ENST00000577435 ANXA3P12429 323 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 BAK1Q16611 211 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 TMEM190Q8WZ59 177 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
GGA3-203ENST00000577435 CHRDL1Q9BU40 450 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 ENY2Q9NPA8 101 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 C19orf73Q9NVV2 129 aa10.55□□□□□ -0.72
GGA3-203ENST00000577435 MRPL27Q9P0M9 148 aaKnown RBP10.55□□□□□ -0.72
GGA3-203ENST00000577435 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 NAP1L6A6NFF2 107 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 K7EMT4 169 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 CORTO00230 105 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 EDN2P20800 178 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 Q56UQ5 140 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 ZNF57Q68EA5 555 aaPredicted RBP10.54□□□□□ -0.72
GGA3-203ENST00000577435 LGI3Q8N145 548 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 UXS1Q8NBZ7 420 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 CACNG5Q9UF02 275 aa10.54□□□□□ -0.72
GGA3-203ENST00000577435 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 DUXBA0A1W2PPF3 345 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 SULT1A3P0DMM9 295 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 SULT1A4P0DMN0 295 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
GGA3-203ENST00000577435 CCR6P51684 374 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 MLXQ9UH92 298 aa10.53□□□□□ -0.72
GGA3-203ENST00000577435 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
GGA3-203ENST00000577435 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 NUPL2O15504 423 aaKnown RBP10.52□□□□□ -0.73
GGA3-203ENST00000577435 HTR2BP41595 481 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 NPBWR1P48145 328 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
GGA3-203ENST00000577435 RBMS2Q15434 407 aaKnown RBP10.52□□□□□ -0.73
GGA3-203ENST00000577435 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 TRIQKQ629K1 86 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 C11orf87Q6NUJ2 197 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 LYZL2Q7Z4W2 148 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 TMED4Q7Z7H5 227 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 PINX1Q96BK5 328 aaKnown RBP10.52□□□□□ -0.73
GGA3-203ENST00000577435 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
GGA3-203ENST00000577435 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
GGA3-203ENST00000577435 A0A1B0GU03 582 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 TMEM50AO95807 157 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 INPP1P49441 399 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 UBE2MP61081 183 aaKnown RBP10.51□□□□□ -0.73
GGA3-203ENST00000577435 SMCO1Q147U7 214 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 TMEM61Q8N0U2 210 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 ASCL2Q99929 193 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 C7orf50Q9BRJ6 194 aaKnown RBP10.51□□□□□ -0.73
GGA3-203ENST00000577435 FNDC4Q9H6D8 234 aaPredicted RBP10.51□□□□□ -0.73
GGA3-203ENST00000577435 HEYLQ9NQ87 328 aaPredicted RBP10.51□□□□□ -0.73
GGA3-203ENST00000577435 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 U3KQK5 164 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
GGA3-203ENST00000577435 CEBPZOSA8MTT3 80 aa10.5□□□□□ -0.73
GGA3-203ENST00000577435 GNG7O60262 68 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms