RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
TVP23B-208ENST00000575261 PINX1Q96BK5 328 aaKnown RBP7.67□□□□□ -1.18
TVP23B-208ENST00000575261 FBXL17Q9UF56 701 aa7.67□□□□□ -1.18
TVP23B-208ENST00000575261 IGHV3OR16-13A0A075B7E8 117 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 IGHV3-74A0A0B4J1X5 117 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 ATP6V1G2O95670 118 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 MT-CO2P00403 227 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 CA1P00915 261 aaPredicted RBP7.66□□□□□ -1.18
TVP23B-208ENST00000575261 HLA-DMAP28067 261 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 PRSS3P35030 304 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 NANOS2P60321 138 aaKnown RBP7.66□□□□□ -1.18
TVP23B-208ENST00000575261 TSPAN5P62079 268 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 LPCAT3Q6P1A2 487 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 TCF24Q7RTU0 167 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 H2BFWTQ7Z2G1 175 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 TBC1D26Q86UD7 250 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 GBGT1Q8N5D6 347 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 SEC22AQ96IW7 307 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 HERC2O95714 4834 aa7.66□□□□□ -1.18
TVP23B-208ENST00000575261 DNAH2Q9P225 4427 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 ST8SIA3O43173 380 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 DFFBO76075 338 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 IGHV3-48P01763 117 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 TCTAP57738 103 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 ERHP84090 104 aaKnown RBP7.65□□□□□ -1.18
TVP23B-208ENST00000575261 TMEM187Q14656 261 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 KCTD21Q4G0X4 260 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 ST8SIA2Q92186 375 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 MRGPRFQ96AM1 343 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 TMEM231Q9H6L2 316 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 FAT2Q9NYQ8 4349 aa7.65□□□□□ -1.18
TVP23B-208ENST00000575261 TRAV2A0A0B4J234 112 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 DNASE2O00115 360 aaPredicted RBP7.64□□□□□ -1.19
TVP23B-208ENST00000575261 IGKV1-39P01597 117 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 IGKV1D-39P04432 117 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 TGFBR1P36897 503 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 NPBWR1P48145 328 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 DEFB131AP59861 70 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 HSPE1P61604 102 aaKnown RBP7.64□□□□□ -1.19
TVP23B-208ENST00000575261 LEMD1Q68G75 181 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 TOMM20LQ6UXN7 152 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 ZNF600Q6ZNG1 722 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 STHQ8IWL8 128 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 DUSP18Q8NEJ0 188 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 GPX8Q8TED1 209 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 MS4A6AQ9H2W1 248 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 VSIRQ9H7M9 311 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
TVP23B-208ENST00000575261 PUS1Q9Y606 427 aaKnown RBP eCLIP7.64□□□□□ -1.19
TVP23B-208ENST00000575261 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 RCVRNP35243 200 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 SNCAP37840 140 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 RPS19P39019 145 aaKnown RBP7.63□□□□□ -1.19
TVP23B-208ENST00000575261 UCP3P55916 312 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 RPL11P62913 178 aaKnown RBP7.63□□□□□ -1.19
TVP23B-208ENST00000575261 LYSMD2Q8IV50 215 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 SLC35G3Q8N808 338 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 SCPEP1Q9HB40 452 aa7.63□□□□□ -1.19
TVP23B-208ENST00000575261 IGHV3-66A0A0C4DH42 116 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 SMIM31A0A1B0GVY4 71 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 A0A1W2PS18 150 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 C11orf94C9JXX5 98 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 INS-IGF2F8WCM5 200 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 CORTO00230 105 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 DEFB4AO15263 64 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 SCGB2A1O75556 95 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 APOA1P02647 267 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
TVP23B-208ENST00000575261 AKR1C2P52895 323 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 LSM3P62310 102 aaKnown RBP7.62□□□□□ -1.19
TVP23B-208ENST00000575261 TMEM41BQ5BJD5 291 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 SPINK9Q5DT21 86 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 FAM24BQ8N5W8 94 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 PDCD10Q9BUL8 212 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 HRH4Q9H3N8 390 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 VCX3AQ9NNX9 186 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 RABAC1Q9UI14 185 aa7.62□□□□□ -1.19
TVP23B-208ENST00000575261 A0A1B0GU03 582 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 ATG12O94817 140 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 IFNA17P01571 189 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 SPP1P10451 314 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 HOXA1P49639 335 aaPredicted RBP7.61□□□□□ -1.19
TVP23B-208ENST00000575261 SUB1P53999 127 aaKnown RBP eCLIP7.61□□□□□ -1.19
TVP23B-208ENST00000575261 RND3P61587 244 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 PRR20EP86478 221 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 PRR20CP86479 221 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 PRR20DP86480 221 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 PRR20BP86481 221 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 PRR20AP86496 221 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 SNX29P2Q8IUI4 249 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 LILRB2Q8N423 598 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 Q8NAQ8 132 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 YIPF6Q96EC8 236 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 ZNF486Q96H40 463 aaPredicted RBP7.61□□□□□ -1.19
TVP23B-208ENST00000575261 GRAMD2BQ96HH9 432 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 NARS2Q96I59 477 aaKnown RBP7.61□□□□□ -1.19
TVP23B-208ENST00000575261 METTL26Q96S19 204 aa7.61□□□□□ -1.19
TVP23B-208ENST00000575261 COMMD3Q9UBI1 195 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms