RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 LCTP09848 1927 aa1.2□□□□□ -2.22
CHD3-217ENST00000574022 KIF26AQ9ULI4 1882 aaPredicted RBP1.2□□□□□ -2.22
CHD3-217ENST00000574022 DOCK3Q8IZD9 2030 aa1.2□□□□□ -2.22
CHD3-217ENST00000574022 ADGBQ8N7X0 1667 aa1.2□□□□□ -2.22
CHD3-217ENST00000574022 CAMSAP2Q08AD1 1489 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 ATG2BQ96BY7 2078 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 TRGV5A0A0B4J1U4 118 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 DUXBA0A1W2PPF3 345 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 C11orf86A6NJI1 115 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 H3BT86 120 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 GNRH2O43555 120 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 MSMBP08118 114 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 ZNF728P0DKX0 622 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SCGB1A1P11684 91 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 CCL5P13501 91 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 HRES1P13985 223 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 ZNF14P17017 642 aaPredicted RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 GZMHP20718 246 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 PSMB8P28062 276 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SRIP30626 198 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 ALDH3A1P30838 453 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 RPL28P46779 137 aaKnown RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 EIF2B2P49770 351 aaKnown RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 EMP1P54849 157 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SMCO1Q147U7 214 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 LY6EQ16553 131 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 DEFB134Q4QY38 66 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 LINC01554Q52M75 96 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 BCL2L15Q5TBC7 163 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 Q6ZS52 159 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 MIR17HGQ75NE6 70 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SLC35E3Q7Z769 313 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 TRAPPC6BQ86SZ2 158 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 CROCCP2Q86T23 111 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 LHFPL1Q86WI0 220 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 BPIFA4PQ86YQ2 179 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 CLVS1Q8IUQ0 354 aaPredicted RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 HIST3H2BBQ8N257 126 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 C10orf126Q8N4M7 172 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 ZNF561Q8N587 486 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 OR51T1Q8NGJ9 327 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 TERB2Q8NHR7 220 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 DEDD2Q8WXF8 326 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 DOCK6Q96HP0 2047 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SCGB3A1Q96QR1 104 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 IMMP2LQ96T52 175 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 TM2D3Q9BRN9 247 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 CCDC32Q9BV29 185 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 MED11Q9P086 117 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 NYNRINQ9P2P1 1898 aaKnown RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 CKLFQ9UBR5 152 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 MARCOQ9UEW3 520 aaPredicted RBP1.19□□□□□ -2.22
CHD3-217ENST00000574022 NAT8Q9UHE5 227 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 PCTPQ9UKL6 214 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 TIMM9Q9Y5J7 89 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 MINOS1-NBL1R4GNA1 71 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 HSPE1-MOB4S4R3N1 261 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 SLX4Q8IY92 1834 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 PLXND1Q9Y4D7 1925 aa1.19□□□□□ -2.22
CHD3-217ENST00000574022 NCAPD3P42695 1498 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 ZNF106Q9H2Y7 1883 aaKnown RBP1.18□□□□□ -2.22
CHD3-217ENST00000574022 CEP152O94986 1710 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 TECPR2O15040 1411 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 A0A087X0T9 212 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 A0A0J9YX75 114 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 ZNF860A6NHJ4 632 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 SLC22A1O15245 554 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 PIAS1O75925 651 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 DHFRP00374 187 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 PPBPP02775 128 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 OGNP20774 298 aaKnown RBP1.18□□□□□ -2.22
CHD3-217ENST00000574022 NFYAP23511 347 aaPredicted RBP1.18□□□□□ -2.22
CHD3-217ENST00000574022 SRP14P37108 136 aaKnown RBP1.18□□□□□ -2.22
CHD3-217ENST00000574022 CCR2P41597 374 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 EVX1P49640 407 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 BAMBIQ13145 260 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 LTC4SQ16873 150 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 RRN3P1Q2M238 152 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 KRTAP13-2Q52LG2 175 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 PRR9Q5T870 116 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 IFT20Q8IY31 132 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 ST6GALNAC3Q8NDV1 305 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 NUP35Q8NFH5 326 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 OR10J5Q8NHC4 309 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 MAFIPQ8WZ33 124 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 LZICQ8WZA0 190 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 GINS4Q9BRT9 223 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 C6orf62Q9GZU0 229 aaPredicted RBP1.18□□□□□ -2.22
CHD3-217ENST00000574022 TUBA4BQ9H853 241 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 LRTM1Q9HBL6 345 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 OSTCQ9NRP0 149 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 SPANXA1Q9NS26 97 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 LAMTOR3Q9UHA4 124 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 ASB4Q9Y574 426 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 FAM215AQ9Y5M1 114 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 ARHGEF10O15013 1369 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 KIF24Q5T7B8 1368 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 NUP210LQ5VU65 1888 aa1.18□□□□□ -2.22
CHD3-217ENST00000574022 MED1Q15648 1581 aaPredicted RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 PTPRSQ13332 1948 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms