RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PXMP4Q9Y6I8 212 aa13.89□□□□□ -0.19
RPAIN-208ENST00000571043 OOSP1A8MZH6 123 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 E7EUB6 86 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 NDUFS6O75380 124 aaKnown RBP13.88□□□□□ -0.19
RPAIN-208ENST00000571043 YIF1AO95070 293 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 OR13C7P0DN81 318 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 RPL29P47914 159 aaKnown RBP13.88□□□□□ -0.19
RPAIN-208ENST00000571043 CD69Q07108 199 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-208ENST00000571043 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 P2RX4Q99571 388 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 TPSG1Q9NRR2 321 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
RPAIN-208ENST00000571043 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 FAM74A7A6NL05 159 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 TIMM23O14925 209 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 ACTL6BO94805 426 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 VENTXO95231 258 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 CDC34P49427 236 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-208ENST00000571043 LCN2P80188 198 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 WT1-ASQ06250 92 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 FAM74A3Q4VXF1 159 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 MINOS1Q5TGZ0 78 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 SIRPDQ9H106 197 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 MINOS1-NBL1R4GNA1 71 aa13.87□□□□□ -0.19
RPAIN-208ENST00000571043 CELSR1Q9NYQ6 3014 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 ZFP92A6NM28 416 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
RPAIN-208ENST00000571043 KLRD1Q13241 179 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 MIC13Q5XKP0 118 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 PPP1R27Q86WC6 154 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 CFHR4Q92496 578 aa13.86□□□□□ -0.19
RPAIN-208ENST00000571043 METTL1Q9UBP6 276 aaKnown RBP13.86□□□□□ -0.19
RPAIN-208ENST00000571043 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 B4DSR2 109 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 CNTFRP26992 372 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-208ENST00000571043 B2MP61769 119 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PRR20EP86478 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PRR20CP86479 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PRR20DP86480 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PRR20BP86481 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PRR20AP86496 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 PVRIGQ6DKI7 326 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 CCDC144NLQ6NUI1 221 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 ZNF114Q8NC26 417 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 TLN2Q9Y4G6 2542 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 HOXB4P17483 251 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-208ENST00000571043 GAMTQ14353 236 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 TNXAQ16473 311 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 SLC16A13Q7RTY0 426 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 CIARTQ8N365 385 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-208ENST00000571043 STPG3Q8N7X2 389 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 CYB561D1Q8N8Q1 229 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 SLC35E1Q96K37 410 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
RPAIN-208ENST00000571043 NUPL2O15504 423 aaKnown RBP13.84□□□□□ -0.19
RPAIN-208ENST00000571043 MSMBP08118 114 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 PSMB3P49720 205 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 GCSAMLQ5JQS6 135 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 LINC01356Q8N9X3 169 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 SSMEM1Q8WWF3 244 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
RPAIN-208ENST00000571043 HILPDAQ9Y5L2 63 aa13.84□□□□□ -0.19
RPAIN-208ENST00000571043 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
RPAIN-208ENST00000571043 MOSP00540 346 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 RHEBQ15382 184 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 AWAT1Q58HT5 328 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 NPBQ8NG41 125 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 FBXL15Q9H469 300 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.2
RPAIN-208ENST00000571043 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
RPAIN-208ENST00000571043 SVEP1Q4LDE5 3571 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 CYSRT1A8MQ03 144 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 M0R036 132 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 TSPAN4O14817 238 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 EIF3GO75821 320 aaKnown RBP eCLIP13.82□□□□□ -0.2
RPAIN-208ENST00000571043 TOX4O94842 621 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 NDUFA3O95167 84 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 FBP1P09467 338 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 LINC00869P0C866 280 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 LGALS4P56470 323 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 SPNS3Q6ZMD2 512 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 TMPRSS5Q9H3S3 457 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 SMCO4Q9NRQ5 59 aa13.82□□□□□ -0.2
RPAIN-208ENST00000571043 TET2Q6N021 2002 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-208ENST00000571043 C7orf77A4D0Y5 90 aa13.81□□□□□ -0.2
RPAIN-208ENST00000571043 NBR2O15453 112 aa13.81□□□□□ -0.2
RPAIN-208ENST00000571043 TSPAN9O75954 239 aa13.81□□□□□ -0.2
RPAIN-208ENST00000571043 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
RPAIN-208ENST00000571043 STAG3L2P0CL84 134 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms