RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TMEM213A2RRL7 107 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 SRRM4A7MD48 611 aaKnown RBP6.59□□□□□ -1.36
TCF4-246ENST00000570287 J3QT63 122 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 CHST1O43916 411 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 SLC25A6P12236 298 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 CFHR3Q02985 330 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 SPIN3Q5JUX0 258 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 ZNF818PQ6ZRF7 136 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 PIP4P1Q86T03 277 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 ZNF695Q8IW36 515 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 Q9H8V8 135 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 RNF114Q9Y508 228 aa6.59□□□□□ -1.36
TCF4-246ENST00000570287 SAA2-SAA4A0A096LPE2 208 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 TRAV24A0A0B4J272 114 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 IGKV1-6A0A0C4DH72 117 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 WDR1O75083 606 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 SERF1AO75920 110 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 REG1AP05451 166 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 CA6P23280 308 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 PPP1CBP62140 327 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 TGFBR3Q03167 851 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 MSMO1Q15800 293 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 GAPTQ8N292 157 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 SUMF1Q8NBK3 374 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 OR10X1Q8NGY0 326 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 ZNF488Q96MN9 340 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 CHD3Q12873 2000 aaKnown RBP6.58□□□□□ -1.36
TCF4-246ENST00000570287 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 IGHV2-26A0A0B4J1V2 119 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 PIGBOS1A0A0B4J2F0 54 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 IGHV1-69-2A0A0G2JMI3 117 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 PCNX2A6NKB5 2137 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 HSPB6O14558 160 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 IGHG3P01860 377 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 VDAC1P21796 283 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
TCF4-246ENST00000570287 PCSK4Q6UW60 755 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 Q8IYB0 196 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 PNKDQ8N490 385 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 ZNF525Q8N782 197 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 TIMM9Q9Y5J7 89 aa6.58□□□□□ -1.36
TCF4-246ENST00000570287 IGKV1D-13A0A0B4J2D9 117 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 LRP5LA4QPB2 252 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 IGKV1-13P0DP09 117 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 TSPOP30536 169 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 CLEC12BQ2HXU8 276 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 FAM78BQ5VT40 261 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR4C5Q8NGB2 326 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR5B3Q8NH48 314 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 CLCF1Q9UBD9 225 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 H0Y980 276 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 CORTO00230 105 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 DEGS1O15121 323 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 GPX1P07203 203 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 IGHV1-2P23083 117 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 S100GP29377 79 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 CFHR2P36980 270 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 PSMB3P49720 205 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
TCF4-246ENST00000570287 Q6P435 159 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 UNQ5815/PRO19632Q6UWF5 114 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 MOB1BQ7L9L4 216 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 RPP25LQ8N5L8 163 aaKnown RBP6.57□□□□□ -1.36
TCF4-246ENST00000570287 RDH5Q92781 318 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 UHRF2Q96PU4 802 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 CCL28Q9NRJ3 127 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 POLDIP2Q9Y2S7 368 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR2W1Q9Y3N9 320 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 ARID1AO14497 2285 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 IGLC7A0M8Q6 106 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 SRSF6Q13247 344 aaKnown RBP6.57□□□□□ -1.36
TCF4-246ENST00000570287 LDLRAD2Q5SZI1 272 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 ZNF324BQ6AW86 544 aaPredicted RBP6.57□□□□□ -1.36
TCF4-246ENST00000570287 Q6ZN92 141 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR4F17Q8NGA8 305 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 OR4F4Q96R69 305 aa6.57□□□□□ -1.36
TCF4-246ENST00000570287 TRGV11A0A075B6L2 103 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 GRIFINA4D1Z8 144 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 PGLYRP1O75594 196 aaPredicted RBP6.56□□□□□ -1.36
TCF4-246ENST00000570287 IGKV1D-33P01593 117 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 IGKV1-33P01594 117 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 KITLGP21583 273 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 NPPCP23582 126 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 CKS1BP61024 79 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 ERVK11-1P61568 191 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 GABRA6Q16445 453 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 IGFL2Q6UWQ7 119 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 ZNF709Q8N972 641 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 PTH2Q96A98 100 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
TCF4-246ENST00000570287 BET1LQ9NYM9 111 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 MED12LQ86YW9 2145 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 DIRC3C9JPN6 131 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 RS1O15537 224 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 GUSBP1Q15486 140 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 FFAR4Q5NUL3 377 aa6.56□□□□□ -1.36
TCF4-246ENST00000570287 Q6ZT83 130 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms