RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 SHPKQ9UHJ6 478 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 OR2T8A6NH00 312 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 HLA-AP01891 365 aaKnown RBP7.48□□□□□ -1.21
CLN6-209ENST00000569336 CSN3P07498 182 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 IL7P13232 177 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 VAMP1P23763 118 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 MFAP2P55001 183 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 SUPT4H1P63272 117 aaKnown RBP7.48□□□□□ -1.21
CLN6-209ENST00000569336 CD69Q07108 199 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 CNPY1Q3B7I2 92 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 Q56UQ5 140 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 GTSCR1Q86UQ5 136 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 UBAC2Q8NBM4 344 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 SCARB1Q8WTV0 552 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 MARC2Q969Z3 335 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 TXN2Q99757 166 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 B9D2Q9BPU9 175 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 TECRQ9NZ01 308 aaKnown RBP7.48□□□□□ -1.21
CLN6-209ENST00000569336 UFC1Q9Y3C8 167 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 SMAD5-AS1Q9Y6J3 95 aa7.48□□□□□ -1.21
CLN6-209ENST00000569336 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
CLN6-209ENST00000569336 A0A0G2JRQ6 117 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 C2orf70A6NJV1 201 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 K7EIM0 57 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 NDUFA4O00483 81 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 NUPL2O15504 423 aaKnown RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 OR2C1O95371 312 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 FCGR2BP31994 310 aaPredicted RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 HTR2BP41595 481 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 CCR6P51684 374 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 MFAP4P55083 255 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 ELLP55199 621 aaPredicted RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 RELQ04864 619 aaPredicted RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 SMCO1Q147U7 214 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 BAK1Q16611 211 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 SPINK9Q5DT21 86 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 NMSQ5H8A3 153 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 IL34Q6ZMJ4 242 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 NOXA1Q86UR1 476 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 S100ZQ8WXG8 99 aa7.47□□□□□ -1.21
CLN6-209ENST00000569336 PINX1Q96BK5 328 aaKnown RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 HEYLQ9NQ87 328 aaPredicted RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
CLN6-209ENST00000569336 DNAH9Q9NYC9 4486 aa7.46□□□□□ -1.21
CLN6-209ENST00000569336 RPS10-NUDT3A0A1W2PQS6 291 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 CEBPZOSA8MTT3 80 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 I3L2K1 104 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 GNG7O60262 68 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 NDUFB6O95139 128 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 MT-CO2P00403 227 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 FOLR2P14207 255 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 NPBWR1P48145 328 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 HAPLN4Q86UW8 402 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 LRTM2Q8N967 370 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 DUSP18Q8NEJ0 188 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 TMEM190Q8WZ59 177 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 GPR146Q96CH1 333 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 CCDC32Q9BV29 185 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.22
CLN6-209ENST00000569336 HIPK2Q9H2X6 1198 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.22
CLN6-209ENST00000569336 ZC4H2Q9NQZ6 224 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 PTTG2Q9NZH5 202 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
CLN6-209ENST00000569336 IGHV3-21A0A0B4J1V1 117 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 A0A1B0GU03 582 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 SFT2D2O95562 160 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 RNASE2P10153 161 aaKnown RBP7.45□□□□□ -1.22
CLN6-209ENST00000569336 SLC25A6P12236 298 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 CBLN1P23435 193 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 OPRK1P41145 380 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 TNFRSF9Q07011 255 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 PPP1R1AQ13522 171 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 BSXQ3C1V8 233 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 Q6ZRM9 215 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 LYZL2Q7Z4W2 148 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 SLC24A4Q8NFF2 622 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 OR1S1Q8NH92 325 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
CLN6-209ENST00000569336 BATF3Q9NR55 127 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 PRR13Q9NZ81 148 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 MRPL27Q9P0M9 148 aaKnown RBP7.45□□□□□ -1.22
CLN6-209ENST00000569336 HSPB7Q9UBY9 170 aa7.45□□□□□ -1.22
CLN6-209ENST00000569336 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 LINC00854A0A1B0GVQ3 168 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 C15orf62A8K5M9 175 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 FAM90A26D6RGX4 464 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 LYRM1O43325 122 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 NPY1RP25929 384 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 BMI1P35226 326 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
CLN6-209ENST00000569336 CD300EQ496F6 205 aaPredicted RBP7.44□□□□□ -1.22
CLN6-209ENST00000569336 C2orf83Q53S99 150 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 PVRIGQ6DKI7 326 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 UNQ9165/PRO28630Q6UXU0 137 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 RNASEH2CQ8TDP1 164 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms