RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 IGHV3OR16-8A0A075B7F1 116 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 CORTO00230 105 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 SNCAP37840 140 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 RORCP51449 518 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 PMS2P11Q13670 270 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 DUSP18Q8NEJ0 188 aa20.46■□□□□ 0.87
UBFD1-206ENST00000566669 SCGB2A1O75556 95 aa20.45■□□□□ 0.86
UBFD1-206ENST00000566669 IGKV1-39P01597 117 aa20.45■□□□□ 0.86
UBFD1-206ENST00000566669 IGKV1D-39P04432 117 aa20.45■□□□□ 0.86
UBFD1-206ENST00000566669 SUB1P53999 127 aaKnown RBP eCLIP20.45■□□□□ 0.86
UBFD1-206ENST00000566669 FUNDC2Q9BWH2 189 aa20.45■□□□□ 0.86
UBFD1-206ENST00000566669 CSTL1Q9H114 145 aa20.45■□□□□ 0.86
UBFD1-206ENST00000566669 MPTX1A8MV57 137 aa20.44■□□□□ 0.86
UBFD1-206ENST00000566669 B3GALNT1O75752 331 aa20.44■□□□□ 0.86
UBFD1-206ENST00000566669 RPL35AP18077 110 aaKnown RBP20.44■□□□□ 0.86
UBFD1-206ENST00000566669 RNASE10Q5GAN6 216 aaKnown RBP20.44■□□□□ 0.86
UBFD1-206ENST00000566669 PDCD10Q9BUL8 212 aa20.44■□□□□ 0.86
UBFD1-206ENST00000566669 TMEM231Q9H6L2 316 aa20.44■□□□□ 0.86
UBFD1-206ENST00000566669 DFFBO76075 338 aa20.43■□□□□ 0.86
UBFD1-206ENST00000566669 ELK1P19419 428 aa20.43■□□□□ 0.86
UBFD1-206ENST00000566669 PINX1Q96BK5 328 aaKnown RBP20.43■□□□□ 0.86
UBFD1-206ENST00000566669 PLECQ15149 4684 aaKnown RBP20.42■□□□□ 0.86
UBFD1-206ENST00000566669 TRAV2A0A0B4J234 112 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 LY6G6CO95867 125 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 PGAM2P15259 253 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 AKR1C2P52895 323 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 NCS1P62166 190 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 FAM90A2PQ658T7 463 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 ZNF600Q6ZNG1 722 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 SLC35G3Q8N808 338 aa20.42■□□□□ 0.86
UBFD1-206ENST00000566669 PIGPP57054 158 aa20.41■□□□□ 0.86
UBFD1-206ENST00000566669 VBP1P61758 197 aa20.41■□□□□ 0.86
UBFD1-206ENST00000566669 APRG1Q8IVJ8 170 aa20.41■□□□□ 0.86
UBFD1-206ENST00000566669 ZFAND1Q8TCF1 268 aa20.41■□□□□ 0.86
UBFD1-206ENST00000566669 VSIRQ9H7M9 311 aa20.41■□□□□ 0.86
UBFD1-206ENST00000566669 ALMS1Q8TCU4 4167 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 FAM25AB3EWG3 89 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 FAM25CB3EWG5 89 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 FAM25GB3EWG6 89 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 HPGDSO60760 199 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 LHFPL1Q86WI0 220 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 CCDC71LQ8N9Z2 235 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 ZNF414Q96IQ9 312 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 MFFQ9GZY8 342 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 HYDINQ4G0P3 5121 aa20.4■□□□□ 0.86
UBFD1-206ENST00000566669 A0A1W2PS18 150 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 M0QYG6 137 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 IFNA17P01571 189 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 PVRIGQ6DKI7 326 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 TOMM20LQ6UXN7 152 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 TCF24Q7RTU0 167 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 ENY2Q9NPA8 101 aa20.39■□□□□ 0.85
UBFD1-206ENST00000566669 C3orf85A0A1B0GTC6 90 aa20.38■□□□□ 0.85
UBFD1-206ENST00000566669 TFPI2P48307 235 aa20.38■□□□□ 0.85
UBFD1-206ENST00000566669 RRNAD1Q96FB5 475 aaKnown RBP20.38■□□□□ 0.85
UBFD1-206ENST00000566669 RARRES2Q99969 163 aa20.38■□□□□ 0.85
UBFD1-206ENST00000566669 C11orf68Q9H3H3 251 aaKnown RBP20.38■□□□□ 0.85
UBFD1-206ENST00000566669 COPZ2Q9P299 210 aa20.38■□□□□ 0.85
UBFD1-206ENST00000566669 MTFP1Q9UDX5 166 aa20.38■□□□□ 0.85
UBFD1-206ENST00000566669 DNASE2O00115 360 aaPredicted RBP20.37■□□□□ 0.85
UBFD1-206ENST00000566669 ST8SIA3O43173 380 aa20.37■□□□□ 0.85
UBFD1-206ENST00000566669 P0C879 139 aa20.37■□□□□ 0.85
UBFD1-206ENST00000566669 EWSR1Q01844 656 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBFD1-206ENST00000566669 KLK11Q9UBX7 282 aa20.37■□□□□ 0.85
UBFD1-206ENST00000566669 A0A0B4J293 547 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 IGKV1-5P01602 117 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 ZNF182P17025 639 aaPredicted RBP20.36■□□□□ 0.85
UBFD1-206ENST00000566669 TRIM16LQ309B1 348 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 FAM219AQ8IW50 185 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 TERB2Q8NHR7 220 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 TP53RKQ96S44 253 aa20.36■□□□□ 0.85
UBFD1-206ENST00000566669 PUS1Q9Y606 427 aaKnown RBP eCLIP20.36■□□□□ 0.85
UBFD1-206ENST00000566669 IGHV3-49A0A0A0MS15 119 aa20.35■□□□□ 0.85
UBFD1-206ENST00000566669 TMEM50AO95807 157 aa20.35■□□□□ 0.85
UBFD1-206ENST00000566669 IGHV3-48P01763 117 aa20.35■□□□□ 0.85
UBFD1-206ENST00000566669 CD3DP04234 171 aa20.35■□□□□ 0.85
UBFD1-206ENST00000566669 RPL5P46777 297 aaKnown RBP20.35■□□□□ 0.85
UBFD1-206ENST00000566669 SSBP1Q04837 148 aaKnown RBP20.35■□□□□ 0.85
UBFD1-206ENST00000566669 PHLDA1Q8WV24 401 aaPredicted RBP20.35■□□□□ 0.85
UBFD1-206ENST00000566669 NARS2Q96I59 477 aaKnown RBP20.35■□□□□ 0.85
UBFD1-206ENST00000566669 IGKV3-7A0A075B6H7 116 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 NPPCP23582 126 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 HOXA1P49639 335 aaPredicted RBP20.34■□□□□ 0.85
UBFD1-206ENST00000566669 TAS2R19P59542 299 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 TMEM41BQ5BJD5 291 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 GBGT1Q8N5D6 347 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 ST8SIA2Q92186 375 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 MS4A6AQ9H2W1 248 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 ZFAND3Q9H8U3 227 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 CACFD1Q9UGQ2 172 aa20.34■□□□□ 0.85
UBFD1-206ENST00000566669 TRAV30A0A087WSZ9 112 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 PI3P19957 117 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 UCP1P25874 307 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 RPL11P62913 178 aaKnown RBP20.33■□□□□ 0.85
UBFD1-206ENST00000566669 MRPS10P82664 201 aaKnown RBP20.33■□□□□ 0.85
UBFD1-206ENST00000566669 TMEM229BQ8NBD8 167 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 OR52I2Q8NH67 350 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 RNASE11Q8TAA1 199 aaKnown RBP20.33■□□□□ 0.85
UBFD1-206ENST00000566669 METTL26Q96S19 204 aa20.33■□□□□ 0.85
UBFD1-206ENST00000566669 EXTL2Q9UBQ6 330 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms