RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 IGHV3-48P01763 117 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 STHQ8IWL8 128 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 DUSP18Q8NEJ0 188 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 TMEM231Q9H6L2 316 aa15.31■□□□□ 0.04
HERC2-204ENST00000563945 DBX1A6NMT0 343 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 HLA-DMAP28067 261 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 TAS2R20P59543 309 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 DEFB131AP59861 70 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 NEDD8Q15843 81 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 SAMD12Q8N8I0 201 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 FXYD6Q9H0Q3 95 aa15.3■□□□□ 0.04
HERC2-204ENST00000563945 FAM212BQ9NTI7 297 aaPredicted RBP15.3■□□□□ 0.04
HERC2-204ENST00000563945 IGLL5B9A064 214 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 C11orf94C9JXX5 98 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 HRH1P35367 487 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 SNCAP37840 140 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 HSPE1P61604 102 aaKnown RBP15.29■□□□□ 0.04
HERC2-204ENST00000563945 PRCDQ00LT1 54 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 LEMD1Q68G75 181 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 TOMM20LQ6UXN7 152 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 TBC1D26Q86UD7 250 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 ST8SIA2Q92186 375 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 MS4A6AQ9H2W1 248 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 RABAC1Q9UI14 185 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 ANAPC10Q9UM13 185 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 FRAS1Q86XX4 4008 aa15.29■□□□□ 0.04
HERC2-204ENST00000563945 NAT1P18440 290 aa15.28■□□□□ 0.04
HERC2-204ENST00000563945 ZNF600Q6ZNG1 722 aa15.28■□□□□ 0.04
HERC2-204ENST00000563945 ZNF114Q8NC26 417 aa15.28■□□□□ 0.04
HERC2-204ENST00000563945 SEC22AQ96IW7 307 aa15.28■□□□□ 0.04
HERC2-204ENST00000563945 KMT2AQ03164 3969 aa15.27■□□□□ 0.04
HERC2-204ENST00000563945 IGHV3-66A0A0C4DH42 116 aa15.27■□□□□ 0.04
HERC2-204ENST00000563945 A0A1W2PS18 150 aa15.27■□□□□ 0.04
HERC2-204ENST00000563945 PUS1Q9Y606 427 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERC2-204ENST00000563945 TRAV2A0A0B4J234 112 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 SCGB2A1O75556 95 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 NPPCP23582 126 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 SUB1P53999 127 aaKnown RBP eCLIP15.26■□□□□ 0.03
HERC2-204ENST00000563945 TMEM41BQ5BJD5 291 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 MRGPRFQ96AM1 343 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 NARS2Q96I59 477 aaKnown RBP15.26■□□□□ 0.03
HERC2-204ENST00000563945 VSIRQ9H7M9 311 aa15.26■□□□□ 0.03
HERC2-204ENST00000563945 DNAH10Q8IVF4 4471 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 APOHP02749 345 aaPredicted RBP15.25■□□□□ 0.03
HERC2-204ENST00000563945 PRR20EP86478 221 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 PRR20CP86479 221 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 PRR20DP86480 221 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 PRR20BP86481 221 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 PRR20AP86496 221 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 LYSMD2Q8IV50 215 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 SLC35G3Q8N808 338 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 ZNF414Q96IQ9 312 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 PDCD10Q9BUL8 212 aa15.25■□□□□ 0.03
HERC2-204ENST00000563945 IFNA17P01571 189 aa15.24■□□□□ 0.03
HERC2-204ENST00000563945 SPINK9Q5DT21 86 aa15.24■□□□□ 0.03
HERC2-204ENST00000563945 STXBP6Q8NFX7 210 aa15.24■□□□□ 0.03
HERC2-204ENST00000563945 ATG12O94817 140 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 TMEM50AO95807 157 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 RPS19P39019 145 aaKnown RBP15.23■□□□□ 0.03
HERC2-204ENST00000563945 UCP3P55916 312 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 MORN3Q6PF18 240 aaPredicted RBP15.23■□□□□ 0.03
HERC2-204ENST00000563945 LILRB2Q8N423 598 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 TMEM230Q96A57 120 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 METTL26Q96S19 204 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 HRH4Q9H3N8 390 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 ENY2Q9NPA8 101 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 APLNQ9ULZ1 77 aa15.23■□□□□ 0.03
HERC2-204ENST00000563945 CORTO00230 105 aa15.22■□□□□ 0.03
HERC2-204ENST00000563945 IGKV1-39P01597 117 aa15.22■□□□□ 0.03
HERC2-204ENST00000563945 IGKV1D-39P04432 117 aa15.22■□□□□ 0.03
HERC2-204ENST00000563945 MIFP14174 115 aa15.22■□□□□ 0.03
HERC2-204ENST00000563945 TRAV10A0A0B4J240 114 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 IGHV4-28A0A0C4DH34 117 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 SPP1P10451 314 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 PGAM2P15259 253 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 HLA-DMBP28068 263 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 TGFBR1P36897 503 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 AKR1C2P52895 323 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 LSM3P62310 102 aaKnown RBP15.21■□□□□ 0.03
HERC2-204ENST00000563945 GPX8Q8TED1 209 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 GRAMD2BQ96HH9 432 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 ZFAND3Q9H8U3 227 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 SCPEP1Q9HB40 452 aa15.21■□□□□ 0.03
HERC2-204ENST00000563945 ATP6V1G2O95670 118 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 RCVRNP35243 200 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 EIF2B2P49770 351 aaKnown RBP15.2■□□□□ 0.02
HERC2-204ENST00000563945 SNX29P2Q8IUI4 249 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 FAM24BQ8N5W8 94 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 Q8NAQ8 132 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 COMMD3Q9UBI1 195 aa15.2■□□□□ 0.02
HERC2-204ENST00000563945 A0A1B0GU03 582 aa15.19■□□□□ 0.02
HERC2-204ENST00000563945 HOXA1P49639 335 aaPredicted RBP15.19■□□□□ 0.02
HERC2-204ENST00000563945 IZUMO4Q1ZYL8 232 aa15.19■□□□□ 0.02
HERC2-204ENST00000563945 VCX3AQ9NNX9 186 aa15.19■□□□□ 0.02
HERC2-204ENST00000563945 K7EQG2 157 aa15.18■□□□□ 0.02
HERC2-204ENST00000563945 ZNF688P0C7X2 276 aa15.18■□□□□ 0.02
HERC2-204ENST00000563945 RBMY1A1P0DJD3 496 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms