RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SLC25A42Q86VD7 318 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 MS4A15Q8N5U1 240 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 HSD17B11Q8NBQ5 300 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 OR10J5Q8NHC4 309 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 CYGBQ8WWM9 190 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 RAB40CQ96S21 281 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 URM1Q9BTM9 101 aaKnown RBP6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 OR51E2Q9H255 320 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 TRAV2A0A0B4J234 112 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 TMEM272A0A1B0GTI8 110 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 IGLC7A0M8Q6 106 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 GPR183P32249 361 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 RPL27AP46776 148 aaKnown RBP6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 TPBGQ13641 420 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 HSD17B12Q53GQ0 312 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 AHSA2Q719I0 299 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 SCARB1Q8WTV0 552 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 FAM3DQ96BQ1 224 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 RHPN1-AS1Q9BWJ2 59 aa6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 ELF5Q9UKW6 265 aaPredicted RBP6.98□□□□□ -1.29
HDGFL3-204ENST00000563790 LOC102723971A0A1B0GUV8 181 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 MYL12BO14950 172 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ZNF207O43670 478 aaKnown RBP6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 FCGR3BO75015 233 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 HLA-DQB1P01920 261 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ATP5G1P05496 136 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ATP5G3P48201 142 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 NUTF2P61970 127 aaKnown RBP6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 CBX3Q13185 183 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ARFRP1Q13795 201 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 C2orf76Q3KRA6 126 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ACTL10Q5JWF8 245 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 UBE2UQ5VVX9 321 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 ZNF555Q8NEP9 628 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 OR56B1Q8NGI3 324 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 RXFP4Q8TDU9 374 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 MS4A6AQ9H2W1 248 aa6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 RBMX2Q9Y388 322 aaKnown RBP6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 AK6Q9Y3D8 172 aaKnown RBP6.97□□□□□ -1.29
HDGFL3-204ENST00000563790 MARCH11A6NNE9 402 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 C15orf62A8K5M9 175 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 CREBL2O60519 120 aaPredicted RBP6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 HIST1H1DP16402 221 aaKnown RBP6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 PTBP1P26599 531 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 OR2B8PP59922 312 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 RAB11BQ15907 218 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 OR2B11Q5JQS5 317 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 KCTD9Q7L273 389 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 RAB3CQ96E17 227 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 GNPNAT1Q96EK6 184 aaPredicted RBP6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 GPHA2Q96T91 129 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 C20orf24Q9BUV8 137 aa6.96□□□□□ -1.3
HDGFL3-204ENST00000563790 USH2AO75445 5202 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 LYRM9A8MSI8 78 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 DNASE2O00115 360 aaPredicted RBP6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 NDUFA4O00483 81 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 DENRO43583 198 aaKnown RBP6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 ACTL6BO94805 426 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 HIST1H1BP16401 226 aaKnown RBP6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 RPS25P62851 125 aaKnown RBP6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 SPHARQ15513 63 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 OR10R2Q8NGX6 335 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 FCGR1BQ92637 280 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 TMEM203Q969S6 136 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 CXorf58Q96LI9 332 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 PLGRKTQ9HBL7 147 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 OR2W1Q9Y3N9 320 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 NEBP20929 6669 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
HDGFL3-204ENST00000563790 PSCAO43653 123 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 CD5P06127 495 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 HLA-GP17693 338 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 NFYAP23511 347 aaPredicted RBP6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 RPL8P62917 257 aaKnown RBP6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 POU2AF1Q16633 256 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 TIMM50Q3ZCQ8 353 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 LRTM2Q8N967 370 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 TMEM116Q8NCL8 245 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 BPIFB6Q8NFQ5 453 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 OR4S2Q8NH73 311 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 VSTM2AQ8TAG5 236 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 GINS4Q9BRT9 223 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 MND1Q9BWT6 205 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 BET1LQ9NYM9 111 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 RAB22AQ9UL26 194 aa6.94□□□□□ -1.3
HDGFL3-204ENST00000563790 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 J3QRK9 145 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 K7EP13 123 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 HBE1P02100 147 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 DTYMKP23919 212 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 PSMD7P51665 324 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 OR10A3P58181 314 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 FABP5Q01469 135 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms