RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 PRR13Q9NZ81 148 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 EPPK1P58107 5090 aaKnown RBP12.6□□□□□ -0.39
CDT1-202ENST00000562747 DUXBA0A1W2PPF3 345 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 K7EIM0 57 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 NDUFB6O95139 128 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 HLA-AP01891 365 aaKnown RBP12.6□□□□□ -0.39
CDT1-202ENST00000562747 CSN3P07498 182 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 GPR183P32249 361 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 HOXA1P49639 335 aaPredicted RBP12.6□□□□□ -0.39
CDT1-202ENST00000562747 CCR6P51684 374 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 FAM106AQ4KMX7 169 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 SCARB1Q8WTV0 552 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
CDT1-202ENST00000562747 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
CDT1-202ENST00000562747 TGOLN2O43493 480 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 SULT1A3P0DMM9 295 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 SULT1A4P0DMN0 295 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 SNCAP37840 140 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDT1-202ENST00000562747 UBE2MP61081 183 aaKnown RBP12.59□□□□□ -0.39
CDT1-202ENST00000562747 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 SPSB3Q6PJ21 355 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 S100ZQ8WXG8 99 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 MISP3Q96FF7 219 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 CCDC32Q9BV29 185 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
CDT1-202ENST00000562747 SACSQ9NZJ4 4579 aa12.59□□□□□ -0.39
CDT1-202ENST00000562747 LINC00854A0A1B0GVQ3 168 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 I3L2K1 104 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 SFT2D2O95562 160 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 LY86O95711 162 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 SPNP16150 400 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 VAMP1P23763 118 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
CDT1-202ENST00000562747 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 LYZL2Q7Z4W2 148 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 TENM2Q9NT68 2774 aa12.58□□□□□ -0.4
CDT1-202ENST00000562747 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 A8MWP6 167 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 F8W735 103 aaPredicted RBP12.57□□□□□ -0.4
CDT1-202ENST00000562747 C3orf84H3BNL1 204 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 CORTO00230 105 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 MT-CO2P00403 227 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
CDT1-202ENST00000562747 GP9P14770 177 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 BTCP35070 178 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 PPP1R1AQ13522 171 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 TXN2Q99757 166 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 ZC4H2Q9NQZ6 224 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
CDT1-202ENST00000562747 A0A1B0GU03 582 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 MFAP4P55083 255 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 Q56UQ5 140 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
CDT1-202ENST00000562747 ZNF436Q9C0F3 470 aaPredicted RBP12.56□□□□□ -0.4
CDT1-202ENST00000562747 PALMDQ9NP74 551 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 LYSTQ99698 3801 aa12.56□□□□□ -0.4
CDT1-202ENST00000562747 BIRC6Q9NR09 4857 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 CEBPZOSA8MTT3 80 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 PLA2G10O15496 165 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 LYRM1O43325 122 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 HTR2BP41595 481 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
CDT1-202ENST00000562747 CASC10Q5T4H9 136 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 LCN12Q6JVE5 192 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
CDT1-202ENST00000562747 HSPB7Q9UBY9 170 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
CDT1-202ENST00000562747 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 NDUFA4O00483 81 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 SLC25A6P12236 298 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 FOLR2P14207 255 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 TNFRSF9Q07011 255 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 DYNLRB2Q8TF09 96 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 CHRDL1Q9BU40 450 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 TECRQ9NZ01 308 aaKnown RBP12.54□□□□□ -0.4
CDT1-202ENST00000562747 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 UFC1Q9Y3C8 167 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 SORL1Q92673 2214 aa12.54□□□□□ -0.4
CDT1-202ENST00000562747 IGHV3-35A0A0C4DH35 117 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 C9orf170A2RU37 121 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
CDT1-202ENST00000562747 NXPH3O95157 252 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms