RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 PERPQ96FX8 193 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 SLC25A22Q9H936 323 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 RPS10P5Q9NQ39 176 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.295e-8■■■■□ 19.5
PKD1-225ENST00000562297 NBPF19A0A087WUL8 3843 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 SEC14L6B5MCN3 397 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 TEX22C9J3V5 150 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 ACTL6BO94805 426 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
PKD1-225ENST00000562297 ICAM4Q14773 271 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 MMDQ15546 238 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 ZNF506Q5JVG8 444 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 MIC13Q5XKP0 118 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 TMEM144Q7Z5S9 345 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 ZNF114Q8NC26 417 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 TBL2Q9Y4P3 447 aaKnown RBP13.22□□□□□ -0.29
PKD1-225ENST00000562297 PXMP4Q9Y6I8 212 aa13.22□□□□□ -0.29
PKD1-225ENST00000562297 NBR2O15453 112 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 AREGP15514 252 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 LGALS4P56470 323 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 PAX8Q06710 450 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 PMS2P11Q13670 270 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.29
PKD1-225ENST00000562297 RXFP4Q8TDU9 374 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 CACNG8Q8WXS5 425 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 RAB24Q969Q5 203 aa13.21□□□□□ -0.29
PKD1-225ENST00000562297 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.29
PKD1-225ENST00000562297 M0R036 132 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 REG1AP05451 166 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 GPX4P36969 197 aaPredicted RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 FLI1Q01543 452 aaPredicted RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 EBI3Q14213 229 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 Q8N6K4 173 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 MLXQ9UH92 298 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 LOC102723971A0A1B0GUV8 181 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 HMGB3O15347 200 aaKnown RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
PKD1-225ENST00000562297 MFAP2P55001 183 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 GNB1P62873 340 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 PRR20EP86478 221 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 PRR20CP86479 221 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 PRR20DP86480 221 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 PRR20BP86481 221 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 PRR20AP86496 221 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 SLC16A13Q7RTY0 426 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
PKD1-225ENST00000562297 C7orf77A4D0Y5 90 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 COLCA2A8K830 154 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 SAA4P35542 130 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.35e-6■■■■■ 28.3
PKD1-225ENST00000562297 KHDC3LQ587J8 217 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 OR2T10Q8NGZ9 312 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 SRSF12Q8WXF0 261 aaKnown RBP13.19□□□□□ -0.3
PKD1-225ENST00000562297 MALSU1Q96EH3 234 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 APCP25054 2843 aa13.19□□□□□ -0.3
PKD1-225ENST00000562297 CYB5BO43169 146 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 HSPB1P04792 205 aaKnown RBP13.18□□□□□ -0.3
PKD1-225ENST00000562297 SRP19P09132 144 aaKnown RBP13.18□□□□□ -0.3
PKD1-225ENST00000562297 LINC00869P0C866 280 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 BCL2P10415 239 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
PKD1-225ENST00000562297 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 OR2T6Q8NHC8 308 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 ZANQ9Y493 2812 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 CENPVL3A0A0U1RRI6 287 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 CRYBA1P05813 215 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 FBP1P09467 338 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 APELAP0DMC3 54 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 B2MP61769 119 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 RAB31Q13636 194 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 PLGLAQ15195 96 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 C5orf64Q2M2E5 130 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 MRPL41Q8IXM3 137 aaKnown RBP13.18□□□□□ -0.3
PKD1-225ENST00000562297 TMPRSS5Q9H3S3 457 aa13.18□□□□□ -0.3
PKD1-225ENST00000562297 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 HES1Q14469 280 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
PKD1-225ENST00000562297 MRPL36Q9P0J6 103 aaKnown RBP13.17□□□□□ -0.3
PKD1-225ENST00000562297 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 CRYGCP07315 174 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 COL8A1P27658 744 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 CEBPGP53567 150 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 TMEM249Q2WGJ8 235 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
PKD1-225ENST00000562297 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
PKD1-225ENST00000562297 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms