RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 IFNA4P05014 189 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 REG1AP05451 166 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 NMBP08949 121 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 GPX4P36969 197 aaPredicted RBP8.9□□□□□ -0.98
SNX1-212ENST00000560861 SNCAP37840 140 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 RUNX1Q01196 453 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 LY6EQ16553 131 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 FAM74A1Q5RGS3 127 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 LILRB2Q8N423 598 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 TTC9CQ8N5M4 171 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 OR5R1Q8NH85 324 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 RNASEH2CQ8TDP1 164 aaKnown RBP8.9□□□□□ -0.98
SNX1-212ENST00000560861 C22orf15Q8WYQ4 148 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 TAF15Q92804 592 aaKnown RBP eCLIP8.9□□□□□ -0.98
SNX1-212ENST00000560861 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
SNX1-212ENST00000560861 FNDC4Q9H6D8 234 aaPredicted RBP8.9□□□□□ -0.98
SNX1-212ENST00000560861 TMEM160Q9NX00 188 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 PITPNC1Q9UKF7 332 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
SNX1-212ENST00000560861 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
SNX1-212ENST00000560861 SH2D7A6NKC9 451 aaPredicted RBP8.89□□□□□ -0.99
SNX1-212ENST00000560861 M0QZK8 103 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 ATP6V0E1O15342 81 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 IFNA5P01569 189 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 APELAP0DMC3 54 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 SULT1A2P50226 295 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 SUB1P53999 127 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNX1-212ENST00000560861 MLANAQ16655 118 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 SPNS3Q6ZMD2 512 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 IL17RELQ6ZVW7 336 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 SGMS2Q8NHU3 365 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 CACNG8Q8WXS5 425 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 GNPNAT1Q96EK6 184 aaPredicted RBP8.89□□□□□ -0.99
SNX1-212ENST00000560861 SLC25A32Q9H2D1 315 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 YAE1D1Q9NRH1 226 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
SNX1-212ENST00000560861 C2CD3Q4AC94 2353 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 NSD1Q96L73 2696 aaPredicted RBP8.88□□□□□ -0.99
SNX1-212ENST00000560861 IGLV11-55A0A075B6I3 123 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 IGHG2P01859 326 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 GAMTQ14353 236 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 EIF5AL1Q6IS14 154 aaKnown RBP8.88□□□□□ -0.99
SNX1-212ENST00000560861 BTNL8Q6UX41 500 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 OR2G3Q8NGZ4 309 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 ABHD5Q8WTS1 349 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 PCNPQ8WW12 178 aaKnown RBP8.88□□□□□ -0.99
SNX1-212ENST00000560861 FANCD2OSQ96PS1 177 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 RSG1Q9BU20 258 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 TMUB1Q9BVT8 246 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 WNT10AQ9GZT5 417 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 MRPL36Q9P0J6 103 aaKnown RBP8.88□□□□□ -0.99
SNX1-212ENST00000560861 ZNF580Q9UK33 172 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 VPREB3Q9UKI3 123 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 HIVEP2P31629 2446 aa8.88□□□□□ -0.99
SNX1-212ENST00000560861 IGKV1OR2-108A0A075B7D4 117 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 I3L2K1 104 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 K7EIM0 57 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 MPDU1O75352 247 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 IGF1P05019 195 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 FGF7P21781 194 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 TMEM144Q7Z5S9 345 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 LFNGQ8NES3 379 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
SNX1-212ENST00000560861 SCGB1C1Q8TD33 95 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 MGST2Q99735 147 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 NPVFQ9HCQ7 196 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 PARP11Q9NR21 331 aa8.87□□□□□ -0.99
SNX1-212ENST00000560861 NF1P21359 2839 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 IGKV1D-37A0A075B6S9 117 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 LINC00862A6NCI5 91 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 CORTO00230 105 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 LY6G6DO95868 133 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 BLCAPP62952 87 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 AKIRIN2Q53H80 203 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 Q6ZS46 218 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 SIGLECL1Q8N7X8 197 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 THAP8Q8NA92 274 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 OR1L6Q8NGR2 347 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 OR2T6Q8NHC8 308 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 TMEM68Q96MH6 324 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 SMR3AQ99954 134 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 GGTLC1Q9BX51 225 aa8.86□□□□□ -0.99
SNX1-212ENST00000560861 UMAD1C9J7I0 102 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 G3V318 75 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 HOXA3O43365 443 aaPredicted RBP8.85□□□□□ -0.99
SNX1-212ENST00000560861 SOX15O60248 233 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 BRI3O95415 125 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 MT-CO2P00403 227 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 FOSL1P15407 271 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 RAB5CP51148 216 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 SERF2P84101 59 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
SNX1-212ENST00000560861 TMEM182Q6ZP80 229 aaPredicted RBP8.85□□□□□ -0.99
SNX1-212ENST00000560861 TMEM116Q8NCL8 245 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms