RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SUB1P53999 127 aaKnown RBP eCLIP9.54□□□□□ -0.88
SLIRP-211ENST00000557623 MFAP2P55001 183 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 SPCS3P61009 180 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 SUPT4H1P63272 117 aaKnown RBP9.54□□□□□ -0.88
SLIRP-211ENST00000557623 FAM106AQ4KMX7 169 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 AARDQ4LEZ3 155 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 CENPSQ8N2Z9 138 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 GPR146Q96CH1 333 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 GAR1Q9NY12 217 aaKnown RBP9.54□□□□□ -0.88
SLIRP-211ENST00000557623 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 LGALS9O00182 355 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 OR2C1O95371 312 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 LY86O95711 162 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 CSN3P07498 182 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SULT1A3P0DMM9 295 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SULT1A4P0DMN0 295 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 GPR183P32249 361 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
SLIRP-211ENST00000557623 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SPINK9Q5DT21 86 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SPSB3Q6PJ21 355 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 PLET1Q6UQ28 207 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 Q6ZRM9 215 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SCARB1Q8WTV0 552 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 S100ZQ8WXG8 99 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 MISP3Q96FF7 219 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 BSCL2Q96G97 398 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-211ENST00000557623 BATF3Q9NR55 127 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 C21orf62Q9NYP8 219 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 CACNG5Q9UF02 275 aa9.53□□□□□ -0.88
SLIRP-211ENST00000557623 SORL1Q92673 2214 aa9.52□□□□□ -0.88
SLIRP-211ENST00000557623 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 K7EIM0 57 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 CORTO00230 105 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 TGOLN2O43493 480 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 NDUFB6O95139 128 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 HLA-AP01891 365 aaKnown RBP9.52□□□□□ -0.89
SLIRP-211ENST00000557623 SPNP16150 400 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 VAMP1P23763 118 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 CCR6P51684 374 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 PRR25Q96S07 402 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 CCDC32Q9BV29 185 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 PALMDQ9NP74 551 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
SLIRP-211ENST00000557623 OR2T8A6NH00 312 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 SFT2D2O95562 160 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 GP9P14770 177 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 MFAP4P55083 255 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 SMCO1Q147U7 214 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 Q56UQ5 140 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 LRTM2Q8N967 370 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 TXN2Q99757 166 aa9.51□□□□□ -0.89
SLIRP-211ENST00000557623 IGHV3-21A0A0B4J1V1 117 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 A0A1B0GU03 582 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 ZNF320A2RRD8 509 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 CEBPZOSA8MTT3 80 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 A8MWP6 167 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 I3L2K1 104 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 MT-CO2P00403 227 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
SLIRP-211ENST00000557623 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-211ENST00000557623 HTR2BP41595 481 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 PPP1R1AQ13522 171 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 UBAC2Q8NBM4 344 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 DYNLRB2Q8TF09 96 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 PINX1Q96BK5 328 aaKnown RBP9.5□□□□□ -0.89
SLIRP-211ENST00000557623 ZNF436Q9C0F3 470 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-211ENST00000557623 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-211ENST00000557623 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 PTTG2Q9NZH5 202 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
SLIRP-211ENST00000557623 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
SLIRP-211ENST00000557623 LYRM1O43325 122 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 SLC25A6P12236 298 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 BTCP35070 178 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 ELLP55199 621 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-211ENST00000557623 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-211ENST00000557623 NOXA1Q86UR1 476 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 DUSP18Q8NEJ0 188 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 TECRQ9NZ01 308 aaKnown RBP9.49□□□□□ -0.89
SLIRP-211ENST00000557623 UFC1Q9Y3C8 167 aa9.49□□□□□ -0.89
SLIRP-211ENST00000557623 LSM4Q9Y4Z0 139 aaKnown RBP9.49□□□□□ -0.89
SLIRP-211ENST00000557623 C9orf170A2RU37 121 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 NDUFA4O00483 81 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 PLA2G10O15496 165 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 GNG7O60262 68 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 FOLR2P14207 255 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 CBLN1P23435 193 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms