RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 TMEM50AO95807 157 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 IGKV1-39P01597 117 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 IGKV1D-39P04432 117 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 EIF4EP06730 217 aaKnown RBP5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 SNCAP37840 140 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 TCTAP57738 103 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 SSBP1Q04837 148 aaKnown RBP5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 PHLDA2Q53GA4 152 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 ZNF600Q6ZNG1 722 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 UBAC2Q8NBM4 344 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 ZFAND1Q8TCF1 268 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 AP3S1Q92572 193 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 ZNF414Q96IQ9 312 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 RNF2Q99496 336 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 FUNDC2Q9BWH2 189 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 TMEM231Q9H6L2 316 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 CACFD1Q9UGQ2 172 aa5.75□□□□□ -1.49
PTCSC3-201ENST00000556013 TRAV30A0A087WSZ9 112 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 IGHV3-21A0A0B4J1V1 117 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 CXorf65A6NEN9 183 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 SCGB2A1O75556 95 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 YIF1AO95070 293 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 P0C879 139 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 ZNF182P17025 639 aaPredicted RBP5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 ELK1P19419 428 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 TGFBR1P36897 503 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 LSM3P62310 102 aaKnown RBP5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 DEFB135Q30KP9 77 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 AARDQ4LEZ3 155 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 TMEM41BQ5BJD5 291 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 RNASE10Q5GAN6 216 aaKnown RBP5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 TOMM20LQ6UXN7 152 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 FAM219AQ8IW50 185 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 CCDC71LQ8N9Z2 235 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 OR52E5Q8NH55 327 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 TERB2Q8NHR7 220 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 MISP3Q96FF7 219 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 PDCD10Q9BUL8 212 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 MFFQ9GZY8 342 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 RABL2AQ9UBK7 228 aaPredicted RBP5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 MTFP1Q9UDX5 166 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 UBQLN2Q9UHD9 624 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 RABL2BQ9UNT1 228 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 SELENOKQ9Y6D0 94 aa5.74□□□□□ -1.49
PTCSC3-201ENST00000556013 A0A0B4J293 547 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 C3orf85A0A1B0GTC6 90 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 CLN5O75503 358 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 CD74P04233 296 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 NPPCP23582 126 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 UCP1P25874 307 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 PIGPP57054 158 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 VBP1P61758 197 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 NCS1P62166 190 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 MRPS10P82664 201 aaKnown RBP5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 SURF2Q15527 256 aaPredicted RBP5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 LGALS9CQ6DKI2 356 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 SNX29P2Q8IUI4 249 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 TMEM229BQ8NBD8 167 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 OR4X1Q8NH49 305 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 MRGPRFQ96AM1 343 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 RRNAD1Q96FB5 475 aaKnown RBP5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 RARRES2Q99969 163 aa5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 C11orf68Q9H3H3 251 aaKnown RBP5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 SEPSECSQ9HD40 501 aaKnown RBP5.73□□□□□ -1.49
PTCSC3-201ENST00000556013 DNASE2O00115 360 aaPredicted RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 ZNF207O43670 478 aaKnown RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 HPGDSO60760 199 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 CDS2O95674 445 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 IFNA17P01571 189 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 RNASE2P10153 161 aaKnown RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 PGAM2P15259 253 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 RPL35AP18077 110 aaKnown RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 CRYBB3P26998 211 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 HTR2BP41595 481 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 AKR1C2P52895 323 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 AP2S1P53680 142 aaPredicted RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 TAS2R19P59542 299 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 SPCS3P61009 180 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 BSXQ3C1V8 233 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 TCF24Q7RTU0 167 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 NOXA1Q86UR1 476 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 PINX1Q96BK5 328 aaKnown RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 GRAMD2BQ96HH9 432 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 ABHD1Q96SE0 405 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 ZFAND3Q9H8U3 227 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 ENY2Q9NPA8 101 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 COPZ2Q9P299 210 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 KLK11Q9UBX7 282 aa5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 PUS1Q9Y606 427 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTCSC3-201ENST00000556013 RPS10-NUDT3A0A1W2PQS6 291 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 FAM25AB3EWG3 89 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 FAM25CB3EWG5 89 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 FAM25GB3EWG6 89 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 GABARAPH6UMI1 98 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 ST8SIA3O43173 380 aa5.71□□□□□ -1.5
PTCSC3-201ENST00000556013 GABARAPO95166 117 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms