RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 FUT9Q9Y231 359 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 GTF3C1Q12789 2109 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 A0A0J9YWU9 116 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 SPAARA0A1B0GVQ0 90 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 A8MWL6 223 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 PLXNB1O43157 2135 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 SCO1O75880 301 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 S100A8P05109 93 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 OR5AC1P0C628 307 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 CSN1S1P47710 185 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 TSPEAR-AS2P59090 65 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 COPZ1P61923 177 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 KISS1Q15726 138 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 VMA21Q3ZAQ7 101 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 GFI1BQ5VTD9 330 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 GLIPR1L1Q6UWM5 242 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 TMEM14EPQ6UXP3 125 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 ZNF767PQ75MW2 155 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 RNF175Q8N4F7 328 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 RPP21Q9H633 154 aaKnown RBP2.6□□□□□ -1.99
KTN1-220ENST00000555172 CBLN4Q9NTU7 201 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 ZNF835Q9Y2P0 537 aa2.6□□□□□ -1.99
KTN1-220ENST00000555172 FGD6Q6ZV73 1430 aa2.59□□□□□ -1.99
KTN1-220ENST00000555172 SMG6Q86US8 1419 aaKnown RBP2.59□□□□□ -1.99
KTN1-220ENST00000555172 ZNF407Q9C0G0 2248 aa2.59□□□□□ -1.99
KTN1-220ENST00000555172 ZNF318Q5VUA4 2279 aa2.59□□□□□ -1.99
KTN1-220ENST00000555172 MRC2Q9UBG0 1479 aa2.59□□□□□ -1.99
KTN1-220ENST00000555172 IGHV3OR15-7A0A075B7D8 119 aa2.59□□□□□ -2
KTN1-220ENST00000555172 IGHV3-64DA0A0J9YX35 117 aa2.59□□□□□ -2
KTN1-220ENST00000555172 TLCD2A6NGC4 264 aa2.59□□□□□ -2
KTN1-220ENST00000555172 A8MWP4 228 aa2.59□□□□□ -2
KTN1-220ENST00000555172 LY6LH3BQJ8 138 aa2.59□□□□□ -2
KTN1-220ENST00000555172 IFNA4P05014 189 aa2.59□□□□□ -2
KTN1-220ENST00000555172 PAEPP09466 180 aa2.59□□□□□ -2
KTN1-220ENST00000555172 UCHL1P09936 223 aa2.59□□□□□ -2
KTN1-220ENST00000555172 FABP2P12104 132 aa2.59□□□□□ -2
KTN1-220ENST00000555172 CSRP1P21291 193 aaKnown RBP2.59□□□□□ -2
KTN1-220ENST00000555172 FGF7P21781 194 aa2.59□□□□□ -2
KTN1-220ENST00000555172 PSMB8P28062 276 aa2.59□□□□□ -2
KTN1-220ENST00000555172 TMBIM6P55061 237 aa2.59□□□□□ -2
KTN1-220ENST00000555172 TAS2R45P59539 299 aa2.59□□□□□ -2
KTN1-220ENST00000555172 AMN1Q8IY45 258 aa2.59□□□□□ -2
KTN1-220ENST00000555172 C3orf22Q8N5N4 141 aa2.59□□□□□ -2
KTN1-220ENST00000555172 HIST1H2BAQ96A08 127 aa2.59□□□□□ -2
KTN1-220ENST00000555172 C2orf50Q96LR7 162 aa2.59□□□□□ -2
KTN1-220ENST00000555172 PPP3R2Q96LZ3 170 aa2.59□□□□□ -2
KTN1-220ENST00000555172 NKX6-2Q9C056 277 aaPredicted RBP2.59□□□□□ -2
KTN1-220ENST00000555172 SCRIBQ14160 1630 aa2.58□□□□□ -2
KTN1-220ENST00000555172 MDFIC2A0A1B0GVS7 189 aa2.58□□□□□ -2
KTN1-220ENST00000555172 GGT3PA6NGU5 568 aa2.58□□□□□ -2
KTN1-220ENST00000555172 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
KTN1-220ENST00000555172 HRASP01112 189 aa2.58□□□□□ -2
KTN1-220ENST00000555172 KRASP01116 189 aa2.58□□□□□ -2
KTN1-220ENST00000555172 IGKV1D-33P01593 117 aa2.58□□□□□ -2
KTN1-220ENST00000555172 IGKV1-33P01594 117 aa2.58□□□□□ -2
KTN1-220ENST00000555172 HLA-DMBP28068 263 aa2.58□□□□□ -2
KTN1-220ENST00000555172 SDC2P34741 201 aa2.58□□□□□ -2
KTN1-220ENST00000555172 VEGFCP49767 419 aa2.58□□□□□ -2
KTN1-220ENST00000555172 IL17AQ16552 155 aa2.58□□□□□ -2
KTN1-220ENST00000555172 ZNF181Q2M3W8 571 aa2.58□□□□□ -2
KTN1-220ENST00000555172 C1orf140Q5VVS0 124 aa2.58□□□□□ -2
KTN1-220ENST00000555172 AMTNQ6UX39 209 aa2.58□□□□□ -2
KTN1-220ENST00000555172 CTAGE3PQ8IX95 158 aa2.58□□□□□ -2
KTN1-220ENST00000555172 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
KTN1-220ENST00000555172 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
KTN1-220ENST00000555172 C1QTNF6Q9BXI9 259 aa2.58□□□□□ -2
KTN1-220ENST00000555172 TMEM133Q9H2Q1 129 aa2.58□□□□□ -2
KTN1-220ENST00000555172 CST9LQ9H4G1 147 aa2.58□□□□□ -2
KTN1-220ENST00000555172 FAM60AQ9NP50 221 aa2.58□□□□□ -2
KTN1-220ENST00000555172 SCN3BQ9NY72 215 aa2.58□□□□□ -2
KTN1-220ENST00000555172 SYNJ1O43426 1573 aa2.58□□□□□ -2
KTN1-220ENST00000555172 REREQ9P2R6 1566 aa2.58□□□□□ -2
KTN1-220ENST00000555172 NEO1Q92859 1461 aa2.58□□□□□ -2
KTN1-220ENST00000555172 NUP210Q8TEM1 1887 aaPredicted RBP2.58□□□□□ -2
KTN1-220ENST00000555172 CDK5RAP2Q96SN8 1893 aa2.58□□□□□ -2
KTN1-220ENST00000555172 FMN1Q68DA7 1419 aa2.58□□□□□ -2
KTN1-220ENST00000555172 IGHV3-21A0A0B4J1V1 117 aa2.58□□□□□ -2
KTN1-220ENST00000555172 TRAV38-1A0A0B4J264 116 aa2.58□□□□□ -2
KTN1-220ENST00000555172 A0A1W2PP18 115 aa2.58□□□□□ -2
KTN1-220ENST00000555172 J3QR89 54 aa2.58□□□□□ -2
KTN1-220ENST00000555172 NPFFO15130 113 aa2.58□□□□□ -2
KTN1-220ENST00000555172 LEPROTO15243 131 aa2.58□□□□□ -2
KTN1-220ENST00000555172 RBFOX2O43251 390 aaKnown RBP eCLIP2.58□□□□□ -2
KTN1-220ENST00000555172 IGKV1-16P04430 117 aa2.58□□□□□ -2
KTN1-220ENST00000555172 NUDT2P50583 147 aa2.58□□□□□ -2
KTN1-220ENST00000555172 CCL20P78556 96 aa2.58□□□□□ -2
KTN1-220ENST00000555172 MRPL51Q4U2R6 128 aaKnown RBP2.58□□□□□ -2
KTN1-220ENST00000555172 LINC01554Q52M75 96 aa2.58□□□□□ -2
KTN1-220ENST00000555172 PCP2Q8IVA1 136 aa2.58□□□□□ -2
KTN1-220ENST00000555172 RMI2Q96E14 147 aa2.58□□□□□ -2
KTN1-220ENST00000555172 PDCD10Q9BUL8 212 aa2.58□□□□□ -2
KTN1-220ENST00000555172 TUBA4BQ9H853 241 aa2.58□□□□□ -2
KTN1-220ENST00000555172 LINC00574Q9H8X3 128 aa2.58□□□□□ -2
KTN1-220ENST00000555172 MYH11P35749 1972 aa2.58□□□□□ -2
KTN1-220ENST00000555172 RIMS1Q86UR5 1692 aaKnown RBP2.57□□□□□ -2
KTN1-220ENST00000555172 TNS3Q68CZ2 1445 aa2.57□□□□□ -2
KTN1-220ENST00000555172 IGKV1-9A0A0C4DH69 117 aa2.57□□□□□ -2
KTN1-220ENST00000555172 FAM236AA0A1B0GUQ0 79 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms