RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 OR2J3O76001 311 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HPRT1P00492 218 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HRASP01112 189 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 IGLV1-51P01701 117 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 APOA1P02647 267 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 PMP2P02689 132 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CSN3P07498 182 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 AREGP15514 252 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 NQO2P16083 231 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CTRB1P17538 263 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HLA-GP17693 338 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 ELK1P19419 428 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 PSMB6P28072 239 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HRH1P35367 487 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 MAS1LP35410 378 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 ALDH3B2P48448 385 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SYNJ2BPP57105 145 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 TAS2R31P59538 309 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 TAS2R46P59540 309 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR2B8PP59922 312 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HERV-K104P61576 105 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 RPL8P62917 257 aaKnown RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CATR1Q13166 79 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 AADACL3Q5VUY0 350 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR4A47Q6IF82 309 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 FAM122CQ6P4D5 195 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 DHRS11Q6UWP2 260 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 ADAMTSL5Q6ZMM2 481 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SLC25A42Q86VD7 318 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM17Q86X19 198 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SPAG16Q8N0X2 631 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR9G4Q8NGQ1 327 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR5H2Q8NGV7 314 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR51H1Q8NH63 302 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 OR4A5Q8NH83 315 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 VSTM2AQ8TAG5 236 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 S100A16Q96FQ6 103 aaKnown RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CMTM3Q96MX0 182 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SPIN2AQ99865 258 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 ASCL2Q99929 193 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SPIN2BQ9BPZ2 258 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF2Q9BSG1 426 aaPredicted RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 MRPS26Q9BYN8 205 aaKnown RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SCPEP1Q9HB40 452 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SLC2A9Q9NRM0 540 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SIGLEC8Q9NYZ4 499 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 COMMD9Q9P000 198 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 COMMD3Q9UBI1 195 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 PEF1Q9UBV8 284 aaKnown RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 SMAD5-AS1Q9Y6J3 95 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 TENM3Q9P273 2699 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 IGLV11-55A0A075B6I3 123 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 IZUMO1RA6ND01 250 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 MFSD2BA6NFX1 497 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 PPP5D1E7EU14 171 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 GPR31O00270 319 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 RLN1P04808 185 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 REG1AP05451 166 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 FRMD6-AS1P0C7T7 363 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 RPA2P15927 270 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF182P17025 639 aaPredicted RBP3.12□□□□□ -1.91
VTI1B-203ENST00000554636 HLA-DMAP28067 261 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 PRSS3P35030 304 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 RCVRNP35243 200 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 RORCP51449 518 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
VTI1B-203ENST00000554636 ATP5G2Q06055 141 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 RPEL1Q2QD12 228 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 C15orf32Q32M92 178 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 PHLDA2Q53GA4 152 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 GPR107Q5VW38 600 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 LHFPL1Q86WI0 220 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 SNX29P2Q8IUI4 249 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 SBSPONQ8IVN8 264 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 NECAP1Q8NC96 275 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 OR52I2Q8NH67 350 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 CD300LFQ8TDQ1 290 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 OR4C12Q96R67 309 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
VTI1B-203ENST00000554636 MIXL1Q9H2W2 232 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 HRASLSQ9HDD0 168 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 S4R3C0 116 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 U3KQK5 164 aa3.12□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM213A2RRL7 107 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 C2orf70A6NJV1 201 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 C15orf61A6NNL5 157 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 A8MWP6 167 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 A8MZ25 164 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 LGALS9O00182 355 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 GGCTO75223 188 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 IGKV1-39P01597 117 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 HLA-AP01891 365 aaKnown RBP3.11□□□□□ -1.91
VTI1B-203ENST00000554636 CD74P04233 296 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 IGKV1D-39P04432 117 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
VTI1B-203ENST00000554636 CFC1P0CG37 223 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms