RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 INPP1P49441 399 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF140P52738 457 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 SLC35A2P78381 396 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 ELF3P78545 371 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 FAM53BQ14153 422 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 PDK2Q15119 407 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TAF1AQ15573 450 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 BCL2A1Q16548 175 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 LAIR2Q6ISS4 152 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 RASSF6Q6ZTQ3 369 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 VN1R4Q7Z5H5 301 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF567Q8N184 647 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TMEM156Q8N614 296 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 OR2M3Q8NG83 312 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 SGMS2Q8NHU3 365 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 RNF133Q8WVZ7 376 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TMBIM1Q969X1 311 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 APOBEC3DQ96AK3 386 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TAMM41Q96BW9 452 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TLCD1Q96CP7 247 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 REEP6Q96HR9 211 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 PRSS27Q9BQR3 290 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 SLC22A4Q9H015 551 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 UBQLN4Q9NRR5 601 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 FKBP14Q9NWM8 211 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF407Q9C0G0 2248 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 USF3Q68DE3 2245 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 TEX50A0A1B0GTY4 177 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 A6NED7 52 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR51F1A6NGY5 319 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR5H14A6NHG9 310 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 F5H768 121 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 H3BSA7 217 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 TXNDC9O14530 226 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 AZIN1O14977 448 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR2J2O76002 312 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ISG15P05161 165 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PFN1P07737 140 aaKnown RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR4A8P0C604 315 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR12D1P0DN82 309 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CCL3P10147 92 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ORM2P19652 201 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CRYGSP22914 178 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 KDELR1P24390 212 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CMPK1P30085 196 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OPRM1P35372 400 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PPP1CCP36873 323 aaKnown RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 TGFBR1P36897 503 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 COILP38432 576 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CLDN12P56749 244 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 H2BFSP57053 126 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 DYNLT1P63172 113 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 FLI1Q01543 452 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 RELAQ04206 551 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 TSPAN31Q12999 210 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 BATFQ16520 125 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 RGS21Q2M5E4 152 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 LRRN1Q6UXK5 716 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CCDC121Q6ZUS5 278 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 HIST2H3AQ71DI3 136 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF550Q7Z398 422 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 LYZL2Q7Z4W2 148 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 NIT1Q86X76 327 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 KRT222Q8N1A0 295 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 LRRC25Q8N386 305 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 C3orf56Q8N813 242 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ZIC4Q8N9L1 334 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 BPIFB6Q8NFQ5 453 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 OR51H1Q8NH63 302 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 KLF14Q8TD94 323 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 TNFAIP8L1Q8WVP5 186 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 HIST1H2BAQ96A08 127 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 RAD51AP1Q96B01 352 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PPCDCQ96CD2 204 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 CMBLQ96DG6 245 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PYURFQ96I23 114 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PRAP1Q96NZ9 151 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 MS4A6AQ9H2W1 248 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 MAP1LC3AQ9H492 121 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PROK2Q9HC23 129 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 LINC00527Q9UJ94 153 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 WASHC3Q9Y3C0 194 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 LSM5Q9Y4Y9 91 aaKnown RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ALG5Q9Y673 324 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 ICOSQ9Y6W8 199 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 BIRC6Q9NR09 4857 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PRKDCP78527 4128 aaKnown RBP1.75□□□□□ -2.13
SCFD1-210ENST00000553693 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.75□□□□□ -2.132e-7■■■■■ 63.5
SCFD1-210ENST00000553693 ABCA1O95477 2261 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 DNAJC13O75165 2243 aa1.75□□□□□ -2.13
SCFD1-210ENST00000553693 DSCAMO60469 2012 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 TRRAPQ9Y4A5 3859 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 TRAV8-1A0A0A6YYK1 113 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 IGHV3-43A0A0B4J1X8 118 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 TINCRA0A1B0GVN0 87 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 C17orf51A8MQB3 221 aa1.74□□□□□ -2.13
SCFD1-210ENST00000553693 UBFD1O14562 309 aaKnown RBP1.74□□□□□ -2.13
SCFD1-210ENST00000553693 DCTN3O75935 186 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms