RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SPINK9Q5DT21 86 aa14.07□□□□□ -0.16
CPSF2-202ENST00000553427 LYZL2Q7Z4W2 148 aa14.07□□□□□ -0.16
CPSF2-202ENST00000553427 SCARB1Q8WTV0 552 aa14.07□□□□□ -0.16
CPSF2-202ENST00000553427 BSCL2Q96G97 398 aaPredicted RBP14.07□□□□□ -0.16
CPSF2-202ENST00000553427 ENY2Q9NPA8 101 aa14.07□□□□□ -0.16
CPSF2-202ENST00000553427 ZNF256Q9Y2P7 627 aaPredicted RBP14.07□□□□□ -0.16
CPSF2-202ENST00000553427 TGP01266 2768 aa14.07□□□□□ -0.16
CPSF2-202ENST00000553427 A8MWP6 167 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 I3L2K1 104 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 PLA2G10O15496 165 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 OR2C1O95371 312 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 CSN3P07498 182 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 GPR183P32249 361 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 SNCAP37840 140 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 SMCO1Q147U7 214 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 ANKRD55Q3KP44 614 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 SPSB3Q6PJ21 355 aa14.06□□□□□ -0.16
CPSF2-202ENST00000553427 GAR1Q9NY12 217 aaKnown RBP14.06□□□□□ -0.16
CPSF2-202ENST00000553427 A0A1B0GU03 582 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 LINC00854A0A1B0GVQ3 168 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 F8W735 103 aaPredicted RBP14.05□□□□□ -0.16
CPSF2-202ENST00000553427 CORTO00230 105 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 TGOLN2O43493 480 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 RNASE2P10153 161 aaKnown RBP14.05□□□□□ -0.16
CPSF2-202ENST00000553427 SLC25A6P12236 298 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 SUB1P53999 127 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPSF2-202ENST00000553427 FAM106AQ4KMX7 169 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 TXN2Q99757 166 aa14.05□□□□□ -0.16
CPSF2-202ENST00000553427 LYRM1O43325 122 aa14.04□□□□□ -0.16
CPSF2-202ENST00000553427 PLET1Q6UQ28 207 aa14.04□□□□□ -0.16
CPSF2-202ENST00000553427 MISP3Q96FF7 219 aa14.04□□□□□ -0.16
CPSF2-202ENST00000553427 ZNF436Q9C0F3 470 aaPredicted RBP14.04□□□□□ -0.16
CPSF2-202ENST00000553427 WDR12Q9GZL7 423 aaKnown RBP14.04□□□□□ -0.16
CPSF2-202ENST00000553427 HSPB7Q9UBY9 170 aa14.04□□□□□ -0.16
CPSF2-202ENST00000553427 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
CPSF2-202ENST00000553427 SORL1Q92673 2214 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 MT-CO2P00403 227 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 HTR2BP41595 481 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 MFAP4P55083 255 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 TNFRSF9Q07011 255 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 OR2K2Q8NGT1 345 aa14.03□□□□□ -0.16
CPSF2-202ENST00000553427 C9orf170A2RU37 121 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 OR2T8A6NH00 312 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 C2orf70A6NJV1 201 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 PITX3O75364 302 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 SPNP16150 400 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 ELLP55199 621 aaPredicted RBP14.02□□□□□ -0.17
CPSF2-202ENST00000553427 ADAMTSL5Q6ZMM2 481 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 PRR25Q96S07 402 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 FLVCR2Q9UPI3 526 aa14.02□□□□□ -0.17
CPSF2-202ENST00000553427 IGHV3-21A0A0B4J1V1 117 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 TMEM213A2RRL7 107 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 CEBPZOSA8MTT3 80 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 OR4E1P0C645 316 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 ADMP35318 185 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 DHRS2Q13268 280 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 ZNF846Q147U1 533 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 C2orf83Q53S99 150 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 Q56UQ5 140 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 LYG2Q86SG7 212 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 TMEM190Q8WZ59 177 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 PALMDQ9NP74 551 aa14.01□□□□□ -0.17
CPSF2-202ENST00000553427 HEYLQ9NQ87 328 aaPredicted RBP14.01□□□□□ -0.17
CPSF2-202ENST00000553427 LSM4Q9Y4Z0 139 aaKnown RBP14.01□□□□□ -0.17
CPSF2-202ENST00000553427 DNAH9Q9NYC9 4486 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 FAM90A26D6RGX4 464 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 NDUFA4O00483 81 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 CTSGP08311 255 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 FOLR2P14207 255 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 GP9P14770 177 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 HAPLN4Q86UW8 402 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 SLC24A4Q8NFF2 622 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 MARC2Q969Z3 335 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 PINX1Q96BK5 328 aaKnown RBP14□□□□□ -0.17
CPSF2-202ENST00000553427 CHRDL1Q9BU40 450 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 C20orf85Q9H1P6 137 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 ZC4H2Q9NQZ6 224 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 TECRQ9NZ01 308 aaKnown RBP14□□□□□ -0.17
CPSF2-202ENST00000553427 UFC1Q9Y3C8 167 aa14□□□□□ -0.17
CPSF2-202ENST00000553427 ZNF320A2RRD8 509 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 NUPL2O15504 423 aaKnown RBP13.99□□□□□ -0.17
CPSF2-202ENST00000553427 LY86O95711 162 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 ANXA7P20073 488 aaKnown RBP13.99□□□□□ -0.17
CPSF2-202ENST00000553427 NPBWR1P48145 328 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 ATP5IP56385 69 aaPredicted RBP13.99□□□□□ -0.17
CPSF2-202ENST00000553427 RELQ04864 619 aaPredicted RBP13.99□□□□□ -0.17
CPSF2-202ENST00000553427 ASAH1Q13510 395 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 LCN12Q6JVE5 192 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 UBAC2Q8NBM4 344 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 OR1S1Q8NH92 325 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 COQ8AQ8NI60 647 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
CPSF2-202ENST00000553427 HIPK2Q9H2X6 1198 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 TBC1D24Q9ULP9 559 aa13.99□□□□□ -0.17
CPSF2-202ENST00000553427 UPK1BO75841 260 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 TCRBP04435 133 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 C8orf88P0DMB2 117 aa13.98□□□□□ -0.17
CPSF2-202ENST00000553427 CBLN1P23435 193 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms