RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PLGRKTQ9HBL7 147 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 TAF9BQ9HBM6 251 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 JPT1Q9UK76 154 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 ST3GAL6Q9Y274 331 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 PEX16Q9Y5Y5 336 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 PKD1P98161 4303 aa3.68□□□□□ -1.82
CKAP4-203ENST00000553039 SAA2-SAA4A0A096LPE2 208 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TRBV7-1A0A0A6YYK4 115 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TRAV1-2A0A0B4J238 106 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TRBV5-5A0A0J9YX44 114 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 OR4C45A6NMZ5 311 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 PDCD5O14737 125 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF780AO75290 641 aaPredicted RBP3.67□□□□□ -1.82
CKAP4-203ENST00000553039 PROP1O75360 226 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 DHFRP00374 187 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 APOA2P02652 100 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ISG15P05161 165 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 CD5P06127 495 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 CD2P06729 351 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 UCHL1P09936 223 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 SAA2P0DJI9 122 aaPredicted RBP3.67□□□□□ -1.82
CKAP4-203ENST00000553039 RAB3BP20337 219 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 CCL18P55774 89 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 RPS11P62280 158 aaKnown RBP eCLIP3.67□□□□□ -1.82
CKAP4-203ENST00000553039 INSL4Q14641 139 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 SPANXN2Q5MJ10 180 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 CLEC19AQ6UXS0 136 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 PRSS35Q8N3Z0 413 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TTC9CQ8N5M4 171 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ACOT12Q8WYK0 555 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 EEF1AKMT3Q96AZ1 226 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ADAT3Q96EY9 351 aaPredicted RBP3.67□□□□□ -1.82
CKAP4-203ENST00000553039 SGK494Q96LW2 274 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 DERL3Q96Q80 235 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 METTL9Q9H1A3 318 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TMEM231Q9H6L2 316 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ABRACLQ9P1F3 81 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 CKLFQ9UBR5 152 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF221Q9UK13 617 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 TBC1D24Q9ULP9 559 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 DMRT1Q9Y5R6 373 aa3.67□□□□□ -1.82
CKAP4-203ENST00000553039 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TRAV18A0A075B6X5 111 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 A0A0U1RRA0 63 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TEX48A0A1B0GUV7 120 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 LOC107986453A0A1B0GWG9 222 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 XKRY2A2RUG3 117 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF705EA8MWA4 302 aaPredicted RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 CREBL2O60519 120 aaPredicted RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 ATP6V1G1O75348 118 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 OR2J3O76001 311 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 DFFBO76075 338 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 MAS1P04201 325 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 GLAP06280 429 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 CTSDP07339 412 aaPredicted RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 HIST1H1BP16401 226 aaKnown RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 SRMP19623 302 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PPP1CCP36873 323 aaKnown RBP3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TALDO1P37837 337 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 ETV6P41212 452 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PSMD7P51665 324 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PPP3R1P63098 170 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 DEFA5Q01523 94 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PJVKQ0ZLH3 352 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 GPR176Q14439 515 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 MPV17LQ2QL34 196 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PIGYQ3MUY2 71 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TTC32Q5I0X7 151 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 NHLRC3Q5JS37 347 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 IDNKQ5T6J7 187 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 SFXN4Q6P4A7 337 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PLET1Q6UQ28 207 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 ZNF66Q6ZN08 573 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 PDPNQ86YL7 162 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 OR13C3Q8NGS6 347 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 OR13C9Q8NGT0 318 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 OR4K15Q8NH41 348 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 OR4A16Q8NH70 328 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 CXorf58Q96LI9 332 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TMEM14BQ9NUH8 114 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 GHRLQ9UBU3 117 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 DAPK2Q9UIK4 370 aa3.66□□□□□ -1.82
CKAP4-203ENST00000553039 TEX13DA0A0J9YY54 714 aaPredicted RBP3.65□□□□□ -1.83
CKAP4-203ENST00000553039 IFITM5A6NNB3 132 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 J3QRK9 145 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 K7EMT4 169 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 ITGB1BP1O14713 200 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 RBMXL2O75526 392 aaKnown RBP3.65□□□□□ -1.83
CKAP4-203ENST00000553039 S1PR2O95136 353 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 PRH1P02810 166 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 CRYGBP07316 175 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 APELAP0DMC3 54 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 GTF2F2P13984 249 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 GNB3P16520 340 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 RCC1P18754 421 aaPredicted RBP3.65□□□□□ -1.83
CKAP4-203ENST00000553039 RANBP1P43487 201 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms