RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-211ENST00000551063 SORL1Q92673 2214 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 DUXBA0A1W2PPF3 345 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 A6NHS1 94 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 CENPXA8MT69 81 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 I3L2K1 104 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 SNCAP37840 140 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 NMSQ5H8A3 153 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 CENPSQ8N2Z9 138 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 MISP3Q96FF7 219 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
PRPF40B-211ENST00000551063 IGHV3-21A0A0B4J1V1 117 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 CORTO00230 105 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 NDUFB6O95139 128 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 SULT1A3P0DMM9 295 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 SULT1A4P0DMN0 295 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 CCR6P51684 374 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 SUB1P53999 127 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 UBE2MP61081 183 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 TXN2Q99757 166 aa11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 ZNF436Q9C0F3 470 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-211ENST00000551063 TMEM213A2RRL7 107 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 MT-CO2P00403 227 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 VAMP1P23763 118 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 ELLP55199 621 aaPredicted RBP11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 CNPY1Q3B7I2 92 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 BSXQ3C1V8 233 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 Q56UQ5 140 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 LYZL2Q7Z4W2 148 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 TMEM190Q8WZ59 177 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 CCDC32Q9BV29 185 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 PALMDQ9NP74 551 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
PRPF40B-211ENST00000551063 ZNF320A2RRD8 509 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 NDUFA4O00483 81 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 SFT2D2O95562 160 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 FOLR2P14207 255 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 BTCP35070 178 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 MFAP4P55083 255 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 MARC2Q969Z3 335 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 UFC1Q9Y3C8 167 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
PRPF40B-211ENST00000551063 A0A1B0GU03 582 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 LINC00854A0A1B0GVQ3 168 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 CEBPZOSA8MTT3 80 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 ADMP35318 185 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 HTR2BP41595 481 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 S100ZQ8WXG8 99 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 PINX1Q96BK5 328 aaKnown RBP11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 PTTG2Q9NZH5 202 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 HSPB7Q9UBY9 170 aa11.68□□□□□ -0.54
PRPF40B-211ENST00000551063 NUPL2O15504 423 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 CTSGP08311 255 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 C8orf88P0DMB2 117 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 SLC25A6P12236 298 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 CBLN1P23435 193 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 NPBWR1P48145 328 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 TNFRSF9Q07011 255 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 CD69Q07108 199 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 DEFB114Q30KQ6 69 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 ANKRD55Q3KP44 614 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 C2orf83Q53S99 150 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 DUSP18Q8NEJ0 188 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 SLC24A4Q8NFF2 622 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 HEYLQ9NQ87 328 aaPredicted RBP11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
PRPF40B-211ENST00000551063 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 GNG7O60262 68 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 EDN2P20800 178 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 NOXA1Q86UR1 476 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 BATF3Q9NR55 127 aa11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 MRPL27Q9P0M9 148 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-211ENST00000551063 RPS10-NUDT3A0A1W2PQS6 291 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 C9orf170A2RU37 121 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 PLA2G10O15496 165 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 LYRM1O43325 122 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 PITX3O75364 302 aa11.65□□□□□ -0.54
PRPF40B-211ENST00000551063 OPRK1P41145 380 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms