RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ARID1AO14497 2285 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 TRAV1-1A0A0B4J248 108 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 SMCO3A2RU48 225 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 CGB1A6NKQ9 187 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 NCBP2LA6PVI3 153 aaKnown RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 KRBOX1C9JBD0 128 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 M0QZK8 103 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 MYOD1P15172 320 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 GNB1P62873 340 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 AKR1C1Q04828 323 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 ZNF616Q08AN1 781 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 FXYD3Q14802 87 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 TMEM249Q2WGJ8 235 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 ACOT6Q3I5F7 207 aaPredicted RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 SLC16A13Q7RTY0 426 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 OR10W1Q8NGF6 305 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 ARPC1AQ92747 370 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 CITED4Q96RK1 184 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 P2RX4Q99571 388 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 MDFIQ99750 246 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 FOXC2Q99958 501 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 RSG1Q9BU20 258 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
CACNB3-217ENST00000550483 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.81
CACNB3-217ENST00000550483 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 TGFAP01135 160 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 M6PRP20645 277 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 HNF4GQ14541 408 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 C10orf55Q5SWW7 151 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 CYB5R2Q6BCY4 276 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 ABHD5Q8WTS1 349 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 PCNPQ8WW12 178 aaKnown RBP10.01□□□□□ -0.81
CACNB3-217ENST00000550483 Q96MF0 132 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 C19orf24Q9BVV8 132 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 MOB4Q9Y3A3 225 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
CACNB3-217ENST00000550483 A0A1B0GW64 132 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 CRYGCP07315 174 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
CACNB3-217ENST00000550483 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
CACNB3-217ENST00000550483 SELENOTP62341 195 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 ARSJQ5FYB0 599 aaPredicted RBP10□□□□□ -0.81
CACNB3-217ENST00000550483 C9orf139Q6ZV77 190 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 Q8N9W7 124 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 NANPQ8TBE9 248 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 C17orf50Q8WW18 174 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 FAM210AQ96ND0 272 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 RBM14Q96PK6 669 aaKnown RBP10□□□□□ -0.81
CACNB3-217ENST00000550483 ACTR3CQ9C0K3 210 aaPredicted RBP10□□□□□ -0.81
CACNB3-217ENST00000550483 HRH4Q9H3N8 390 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 THYN1Q9P016 225 aa10□□□□□ -0.81
CACNB3-217ENST00000550483 E7EUB6 86 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
CACNB3-217ENST00000550483 CTRB1P17538 263 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 CX3CL1P78423 397 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 FFAR4Q5NUL3 377 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 CTRB2Q6GPI1 263 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 SSMEM1Q8WWF3 244 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 RNF2Q99496 336 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 GGTLC1Q9BX51 225 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 PLA2G2EQ9NZK7 142 aa9.99□□□□□ -0.81
CACNB3-217ENST00000550483 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 A0A0U1RQK1 487 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 CTXND1A0A1B0GTU2 59 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 I3L521 148 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 FCN1O00602 326 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 AGPAT2O15120 278 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 NDUFS6O75380 124 aaKnown RBP9.98□□□□□ -0.81
CACNB3-217ENST00000550483 MT-CO2P00403 227 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 IFNA1P01562 189 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 FABP1P07148 127 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 DEFA4P12838 97 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 ZP3P21754 424 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 PPT1P50897 306 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 SSBP2P81877 361 aaPredicted RBP9.98□□□□□ -0.81
CACNB3-217ENST00000550483 GAMTQ14353 236 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 PEA15Q15121 130 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 RUSC1-AS1Q66K80 236 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 KRTAP1-3Q8IUG1 177 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 TTC9CQ8N5M4 171 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 OR10G4Q8NGN3 311 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 OR10G9Q8NGN4 311 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 OR10G7Q8NGN6 311 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 OR5R1Q8NH85 324 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 MGST2Q99735 147 aa9.98□□□□□ -0.81
CACNB3-217ENST00000550483 SMR3AQ99954 134 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms