RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 PYY3Q5JQD4 70 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 APCSP02743 223 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 GNG5P63218 68 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 A0A1W2PNU3 283 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 TMEM183BQ1AE95 376 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 IGHV1-46P01743 117 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 OR8B3Q8NGG8 313 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 OR8B2Q96RD0 313 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 GSX1Q9H4S2 264 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 TMEM106BQ9NUM4 274 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 FOXI3A8MTJ6 420 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 IGKV1-16P04430 117 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 ZNF474Q6S9Z5 364 aaPredicted RBP13.33□□□□□ -0.28
VARS2-212ENST00000542001 FA2HQ7L5A8 372 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 TCTEX1D1Q8N7M0 179 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 OR4C13Q8NGP0 309 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 GP6Q9HCN6 339 aa13.33□□□□□ -0.28
VARS2-212ENST00000542001 TUBA4BQ9H853 241 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 PPIAL4CA0A0B4J2A2 164 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 SRRM5B3KS81 715 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 PPIAL4GP0DN37 164 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 FCGR2BP31994 310 aaPredicted RBP13.32□□□□□ -0.28
VARS2-212ENST00000542001 PERPQ96FX8 193 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 RAB1BQ9H0U4 201 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 FAM90A2PQ658T7 463 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 LINC00305Q7Z4B0 112 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 WDR83OSQ9Y284 106 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 SELENOKQ9Y6D0 94 aa13.32□□□□□ -0.28
VARS2-212ENST00000542001 IGHV1-69-2A0A0G2JMI3 117 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 PCP4P48539 62 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 SSC4DQ8WTU2 575 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 SSBP4Q9BWG4 385 aaPredicted RBP13.31□□□□□ -0.28
VARS2-212ENST00000542001 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
VARS2-212ENST00000542001 RNF115Q9Y4L5 304 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 J3QW42 95 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 M0R143 59 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 RBFOX2O43251 390 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■■□ 23.3
VARS2-212ENST00000542001 DLL1O00548 723 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 UBE2CO00762 179 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 ORM1P02763 201 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 CCKARP32238 428 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 EFNB3Q15768 340 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 HAPLN4Q86UW8 402 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 ASCL2Q99929 193 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
VARS2-212ENST00000542001 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 S100A7AQ86SG5 101 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 GGTLC1Q9BX51 225 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 C17orf100A8MU93 164 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 SRP14P37108 136 aaKnown RBP13.3□□□□□ -0.28
VARS2-212ENST00000542001 TMEM256Q8N2U0 113 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 HIST1H2BLQ99880 126 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 IGHV3-66A0A0C4DH42 116 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 TIMP3P35625 211 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 TMEM177Q53S58 311 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 WDR73Q6P4I2 378 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 MBD3L1Q8WWY6 194 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
VARS2-212ENST00000542001 OR5AL1P0C617 328 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 BRS3P32247 399 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 SSX8Q7RTT4 187 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 IFI27L2Q9H2X8 130 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 C15orf62A8K5M9 175 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 BMPR1BO00238 502 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 TANC2Q9HCD6 1990 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
VARS2-212ENST00000542001 YPEL1O60688 119 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 SLC25A15Q9Y619 301 aa13.29□□□□□ -0.28
VARS2-212ENST00000542001 SORL1Q92673 2214 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 NHLH1Q02575 133 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 ZNF124Q15973 351 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 SPRNQ5BIV9 151 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 RNF138Q8WVD3 245 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 ST6GALNAC6Q969X2 333 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 A0A087WWC5 75 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
VARS2-212ENST00000542001 TCF21O43680 179 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 Q6ZPA2 131 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms