RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PRSS3P35030 304 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 HRH1P35367 487 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 NPBWR1P48145 328 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 HSPE1P61604 102 aaKnown RBP8.78□□□□□ -1
CBX3P4-202ENST00000540428 ERHP84090 104 aaKnown RBP8.78□□□□□ -1
CBX3P4-202ENST00000540428 TMEM187Q14656 261 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 PHLDA2Q53GA4 152 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 TOMM20LQ6UXN7 152 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 TBC1D26Q86UD7 250 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 LYSMD2Q8IV50 215 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 GBGT1Q8N5D6 347 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 HRH4Q9H3N8 390 aa8.78□□□□□ -1
CBX3P4-202ENST00000540428 IGHV3OR16-13A0A075B7E8 117 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 IGHV3-74A0A0B4J1X5 117 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 C11orf94C9JXX5 98 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 IGKV1-39P01597 117 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 IGKV1D-39P04432 117 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 HLA-DMAP28067 261 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 UCP3P55916 312 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 TSPAN5P62079 268 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 NEDD8Q15843 81 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 ZNF600Q6ZNG1 722 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 SAMD12Q8N8I0 201 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 DUSP18Q8NEJ0 188 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 GPX8Q8TED1 209 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 ST8SIA2Q92186 375 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 PINX1Q96BK5 328 aaKnown RBP8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 MS4A6AQ9H2W1 248 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 TMEM231Q9H6L2 316 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 HERC2O95714 4834 aa8.77□□□□□ -1.01
CBX3P4-202ENST00000540428 DNASE2O00115 360 aaPredicted RBP8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 RPS19P39019 145 aaKnown RBP8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 DEFB131AP59861 70 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 KCTD21Q4G0X4 260 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 PVRIGQ6DKI7 326 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 MRGPRFQ96AM1 343 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 SCPEP1Q9HB40 452 aa8.76□□□□□ -1.01
CBX3P4-202ENST00000540428 A0A1W2PS18 150 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 CORTO00230 105 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 ATP6V1G2O95670 118 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 IGHV3-48P01763 117 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 APOHP02749 345 aaPredicted RBP8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PRR20EP86478 221 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PRR20CP86479 221 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PRR20DP86480 221 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PRR20BP86481 221 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PRR20AP86496 221 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 LEMD1Q68G75 181 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 STHQ8IWL8 128 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 LILRB2Q8N423 598 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 Q8NAQ8 132 aa8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 PUS1Q9Y606 427 aaKnown RBP eCLIP8.75□□□□□ -1.01
CBX3P4-202ENST00000540428 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 TMEM50AO95807 157 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 SPP1P10451 314 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 MIFP14174 115 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 RCVRNP35243 200 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 TGFBR1P36897 503 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 SNCAP37840 140 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 SUB1P53999 127 aaKnown RBP eCLIP8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 RND3P61587 244 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 ZNF486Q96H40 463 aaPredicted RBP8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 GRAMD2BQ96HH9 432 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
CBX3P4-202ENST00000540428 A0A1B0GU03 582 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 SMIM31A0A1B0GVY4 71 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 ZNF705EA8MWA4 302 aaPredicted RBP8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 IGLL5B9A064 214 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 DEFB4AO15263 64 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 SCGB2A1O75556 95 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 ATG12O94817 140 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 APOA1P02647 267 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 P0C879 139 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 NPPCP23582 126 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 FAM24BQ8N5W8 94 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 SLC35G3Q8N808 338 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 RABAC1Q9UI14 185 aa8.73□□□□□ -1.01
CBX3P4-202ENST00000540428 IGHV4-28A0A0C4DH34 117 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 IGHV3-66A0A0C4DH42 116 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 K7EQG2 157 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 CLN5O75503 358 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 RNASE2P10153 161 aaKnown RBP8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 CRYBB3P26998 211 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 RPL5P46777 297 aaKnown RBP8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 OR4X1Q8NH49 305 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 YIPF6Q96EC8 236 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 METTL26Q96S19 204 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 PDCD10Q9BUL8 212 aa8.72□□□□□ -1.01
CBX3P4-202ENST00000540428 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 A0A0B4J293 547 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 IFNA17P01571 189 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms