RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SCRT2Q9NQ03 307 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 HOXA4Q00056 320 aaPredicted RBP9.23□□□□□ -0.93
PBX1-212ENST00000540236 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 ZNF826PQ6ZT77 177 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 SRFP11831 508 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 ZIC4Q8N9L1 334 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 MYOZ3Q8TDC0 251 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 H1FXQ92522 213 aaKnown RBP9.23□□□□□ -0.93
PBX1-212ENST00000540236 SFXN3Q9BWM7 321 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 TTTY13Q9BZ97 58 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 MOSP00540 346 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 ORM1P02763 201 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
PBX1-212ENST00000540236 PPP1R32Q7Z5V6 425 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 HOXA3O43365 443 aaPredicted RBP9.22□□□□□ -0.93
PBX1-212ENST00000540236 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
PBX1-212ENST00000540236 ZADH2Q8N4Q0 377 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 RNF186Q9NXI6 227 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
PBX1-212ENST00000540236 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 OR4X2Q8NGF9 303 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 DLL3Q9NYJ7 618 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 CGB1A6NKQ9 187 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 SMAD7O15105 426 aaKnown RBP9.22□□□□□ -0.93
PBX1-212ENST00000540236 SCRG1O75711 98 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 PTGDSP41222 190 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 CNEP1R1Q8N9A8 125 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
PBX1-212ENST00000540236 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.93
PBX1-212ENST00000540236 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.93
PBX1-212ENST00000540236 INO80CQ6PI98 192 aaPredicted RBP9.21□□□□□ -0.93
PBX1-212ENST00000540236 FAM222BQ8WU58 562 aa9.21□□□□□ -0.93
PBX1-212ENST00000540236 PRELID3AQ96N28 172 aa9.21□□□□□ -0.93
PBX1-212ENST00000540236 DCTN5Q9BTE1 182 aa9.21□□□□□ -0.93
PBX1-212ENST00000540236 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.93
PBX1-212ENST00000540236 RPP21Q9H633 154 aaKnown RBP9.21□□□□□ -0.93
PBX1-212ENST00000540236 BOKQ9UMX3 212 aaPredicted RBP9.21□□□□□ -0.93
PBX1-212ENST00000540236 A0A1W2PQF6 199 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 FGF12P61328 243 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 GAGE5Q13069 117 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 GAGE6Q13070 117 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 PCSK4Q6UW60 755 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 ZNF766Q5HY98 468 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 LINC00470Q9BZP3 86 aa9.21□□□□□ -0.94
PBX1-212ENST00000540236 IGHMP01871 453 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 ZNF585BQ52M93 769 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 MS4A6AQ9H2W1 248 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 ZNF391Q9UJN7 358 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 CELA2AP08217 269 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 SMIM10L1P0DMW3 83 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 OR4C13Q8NGP0 309 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 SMIM10Q96HG1 83 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 PAPPA2Q9BXP8 1791 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 TRAV3A0A0B4J244 114 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 PEX7O00628 323 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 MPDU1O75352 247 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 CTRLP40313 264 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 HERVK_113P61574 105 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 ONECUT1Q9UBC0 465 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 FAM90A27PA6NNH2 459 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 TMEM262E9PQX1 116 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 COX8AP10176 69 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 SCGB1A1P11684 91 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 PAX1P15863 534 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 TXNDC17Q9BRA2 123 aa9.2□□□□□ -0.94
PBX1-212ENST00000540236 TMEM249Q2WGJ8 235 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 ASCL4Q6XD76 172 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 A0A1B0GX78 115 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 FGF21Q9NSA1 209 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 UTRNP46939 3433 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 NTF4P34130 210 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 RPL30P62888 115 aaKnown RBP9.19□□□□□ -0.94
PBX1-212ENST00000540236 TTC9CQ8N5M4 171 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 C1orf147Q96MC9 270 aaPredicted RBP9.19□□□□□ -0.94
PBX1-212ENST00000540236 CACNA1IQ9P0X4 2223 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 WNT9BO14905 357 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 GNG3P63215 75 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 ZNF658BQ4V348 819 aaPredicted RBP9.19□□□□□ -0.94
PBX1-212ENST00000540236 ODF3L1Q8IXM7 274 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 GGTLC1Q9BX51 225 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
PBX1-212ENST00000540236 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 Q6ZR03 302 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 PLXDC1Q8IUK5 500 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms