RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 APOA1P02647 267 aa9.2□□□□□ -0.94
VAMP1-206ENST00000538970 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
VAMP1-206ENST00000538970 HSPE1P61604 102 aaKnown RBP9.2□□□□□ -0.94
VAMP1-206ENST00000538970 SNX29P2Q8IUI4 249 aa9.2□□□□□ -0.94
VAMP1-206ENST00000538970 PINX1Q96BK5 328 aaKnown RBP9.2□□□□□ -0.94
VAMP1-206ENST00000538970 CMTM3Q96MX0 182 aa9.2□□□□□ -0.94
VAMP1-206ENST00000538970 VCX3AQ9NNX9 186 aa9.2□□□□□ -0.94
VAMP1-206ENST00000538970 COMMD3Q9UBI1 195 aa9.2□□□□□ -0.94
VAMP1-206ENST00000538970 HECTD4Q9Y4D8 3996 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 A0A087WXM4 84 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 SMIM31A0A1B0GVY4 71 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 NCS1P62166 190 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 GATAD1Q8WUU5 269 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 PHLDA1Q8WV24 401 aaPredicted RBP9.19□□□□□ -0.94
VAMP1-206ENST00000538970 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
VAMP1-206ENST00000538970 M0QYG6 137 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 IGKV1-5P01602 117 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 ELK1P19419 428 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 RND3P61587 244 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 ERHP84090 104 aaKnown RBP9.18□□□□□ -0.94
VAMP1-206ENST00000538970 IZUMO4Q1ZYL8 232 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 TCF24Q7RTU0 167 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 GBGT1Q8N5D6 347 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 ST8SIA2Q92186 375 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 RARRES2Q99969 163 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 C11orf68Q9H3H3 251 aaKnown RBP9.18□□□□□ -0.94
VAMP1-206ENST00000538970 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
VAMP1-206ENST00000538970 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 HPGDSO60760 199 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 TNFAIP8O95379 198 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 APOHP02749 345 aaPredicted RBP9.17□□□□□ -0.94
VAMP1-206ENST00000538970 CD5P06127 495 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 P0C879 139 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 NPBWR1P48145 328 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 VBP1P61758 197 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 LHFPL1Q86WI0 220 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
VAMP1-206ENST00000538970 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 ZNF486Q96H40 463 aaPredicted RBP9.17□□□□□ -0.94
VAMP1-206ENST00000538970 TP53RKQ96S44 253 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 FUNDC2Q9BWH2 189 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
VAMP1-206ENST00000538970 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
VAMP1-206ENST00000538970 A0A0B4J293 547 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 ST8SIA3O43173 380 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 PI3P19957 117 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 SNCAP37840 140 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 PIGPP57054 158 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 MS4A6AQ9H2W1 248 aa9.16□□□□□ -0.94
VAMP1-206ENST00000538970 TRAV2A0A0B4J234 112 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 A0A1B0GU03 582 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 CORTO00230 105 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 DEDDO75618 318 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 DFFBO76075 338 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 TMEM50AO95807 157 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 CA1P00915 261 aaPredicted RBP9.15□□□□□ -0.94
VAMP1-206ENST00000538970 RNASE2P10153 161 aaKnown RBP9.15□□□□□ -0.94
VAMP1-206ENST00000538970 PGAM2P15259 253 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 AKR1C2P52895 323 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
VAMP1-206ENST00000538970 RNASE12Q5GAN4 147 aaKnown RBP9.15□□□□□ -0.94
VAMP1-206ENST00000538970 RNASE10Q5GAN6 216 aaKnown RBP9.15□□□□□ -0.94
VAMP1-206ENST00000538970 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 LGALS9CQ6DKI2 356 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 ARRDC1Q8N5I2 433 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 FAM24BQ8N5W8 94 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 C11orf45Q8TAV5 145 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 MFFQ9GZY8 342 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 DNAH10Q8IVF4 4471 aa9.15□□□□□ -0.94
VAMP1-206ENST00000538970 C3orf85A0A1B0GTC6 90 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 DNASE2O00115 360 aaPredicted RBP9.14□□□□□ -0.95
VAMP1-206ENST00000538970 ATG12O94817 140 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 IFNA17P01571 189 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 CD3DP04234 171 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 TBPP20226 339 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 HOXA1P49639 335 aaPredicted RBP9.14□□□□□ -0.95
VAMP1-206ENST00000538970 RORCP51449 518 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 PPP5CP53041 499 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 DEFB131AP59861 70 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
VAMP1-206ENST00000538970 PDCD10Q9BUL8 212 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 FNDC4Q9H6D8 234 aaPredicted RBP9.14□□□□□ -0.95
VAMP1-206ENST00000538970 MRPL36Q9P0J6 103 aaKnown RBP9.14□□□□□ -0.95
VAMP1-206ENST00000538970 KLK11Q9UBX7 282 aa9.14□□□□□ -0.95
VAMP1-206ENST00000538970 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 FAM25AB3EWG3 89 aa9.13□□□□□ -0.95
VAMP1-206ENST00000538970 FAM25CB3EWG5 89 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms