RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
CLN6-202ENST00000538696 WT1-ASQ06250 92 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 ZNF266Q14584 549 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 ZNF562Q6V9R5 426 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 ETV3LQ6ZN32 361 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 SLC35E3Q7Z769 313 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 HSD17B11Q8NBQ5 300 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 C16orf95Q9H693 158 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 FBXO7Q9Y3I1 522 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 ATP6V0E1O15342 81 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 RAB11AP62491 216 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 FXYD3Q14802 87 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 BSXQ3C1V8 233 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 OR10P1Q8NGE3 313 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 TMEM147Q9BVK8 224 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 SH3BGRL3Q9H299 93 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
CLN6-202ENST00000538696 UBE2L5PA0A1B0GUS4 154 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 TEX22C9J3V5 150 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 FBXO24O75426 580 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 EGR2P11161 476 aaPredicted RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 ERHP84090 104 aaKnown RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 ARSJQ5FYB0 599 aaPredicted RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 OR2T6Q8NHC8 308 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 SRSF12Q8WXF0 261 aaKnown RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 PINX1Q96BK5 328 aaKnown RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
CLN6-202ENST00000538696 PARP11Q9NR21 331 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 SERTAD4Q9NUC0 356 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
CLN6-202ENST00000538696 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
CLN6-202ENST00000538696 CNIH1O95406 144 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 IFNA5P01569 189 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 IFNA4P05014 189 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 REG1AP05451 166 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 APELAP0DMC3 54 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 AREGP15514 252 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 ATP6V0CP27449 155 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 RUNX1Q01196 453 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 ATP6V1FQ16864 119 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 CLLU1Q5K131 121 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 OR4F5Q8NH21 305 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 LINC01006Q8NI28 216 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 ABHD5Q8WTS1 349 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
CLN6-202ENST00000538696 IGF1P05019 195 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 NMBP08949 121 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 MDKP21741 143 aaPredicted RBP13.52□□□□□ -0.25
CLN6-202ENST00000538696 SNCAP37840 140 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.25
CLN6-202ENST00000538696 VWC2Q2TAL6 325 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 SLC25A24Q6NUK1 477 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.25
CLN6-202ENST00000538696 SLC25A32Q9H2D1 315 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 UQCC1Q9NVA1 299 aa13.52□□□□□ -0.25
CLN6-202ENST00000538696 AP4M1O00189 453 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 SPP1P10451 314 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 RIPPLY3P57055 190 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 DLK1P80370 383 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 C19orf54Q5BKX5 351 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 P2RX4Q99571 388 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
CLN6-202ENST00000538696 WDR61Q9GZS3 305 aaKnown RBP13.51□□□□□ -0.25
CLN6-202ENST00000538696 ZNF580Q9UK33 172 aa13.51□□□□□ -0.25
CLN6-202ENST00000538696 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 CLPSL1A2RUU4 121 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 ATP5IP56385 69 aaPredicted RBP13.5□□□□□ -0.25
CLN6-202ENST00000538696 RAB14P61106 215 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 ASPHD1Q5U4P2 390 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
CLN6-202ENST00000538696 MRPL41Q8IXM3 137 aaKnown RBP13.5□□□□□ -0.25
CLN6-202ENST00000538696 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 C19orf24Q9BVV8 132 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 WNT10AQ9GZT5 417 aa13.5□□□□□ -0.25
CLN6-202ENST00000538696 TRAV41A0A0B4J266 112 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 G3V318 75 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 FGF7P21781 194 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 MFAP2P55001 183 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 ZNF114Q8NC26 417 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 LFNGQ8NES3 379 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 CXorf58Q96LI9 332 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
CLN6-202ENST00000538696 GGACTQ9BVM4 153 aa13.49□□□□□ -0.25
CLN6-202ENST00000538696 SULT1A2P50226 295 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 PROK1P58294 105 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 CFHR3Q02985 330 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 FOXL1Q12952 345 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 PVRIGQ6DKI7 326 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms