RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 H7C1H1 209 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 CRPP02741 224 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 WNT2P09544 360 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 SELLP14151 372 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 UCP3P55916 312 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 SLC25A28Q96A46 364 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 WBP1Q96G27 269 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 NPDC1Q9NQX5 325 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 MT-ND6P03923 174 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 JOSD1Q15040 202 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 MORN2Q502X0 79 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 TM2D1Q9BX74 207 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 PAQR4Q8N4S7 273 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 DNAL4O96015 105 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 C19orf24Q9BVV8 132 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 J3QW42 95 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 TSPAN13O95857 204 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 IGKV1-13P0DP09 117 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 PYYP10082 97 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 CDX1P47902 265 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 NDPQ00604 133 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 PRR30Q53SZ7 412 aaPredicted RBP9.33□□□□□ -0.92
LINC00346-201ENST00000538077 FLVCR1-AS1Q8TAF5 88 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 CCDC88CQ9P219 2028 aa9.33□□□□□ -0.92
LINC00346-201ENST00000538077 C2orf68Q2NKX9 166 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 FER1L6-AS1Q8NA97 138 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 OR9G4Q8NGQ1 327 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 ANK1P16157 1881 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 ASCL4Q6XD76 172 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 IFI6P09912 130 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 RPL15P61313 204 aaKnown RBP9.32□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 SHISA3A0PJX4 238 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 PRR32B1ATL7 298 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 UPK2O00526 184 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 FAM166AQ6J272 317 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
LINC00346-201ENST00000538077 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
LINC00346-201ENST00000538077 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
LINC00346-201ENST00000538077 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 NMBP08949 121 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF497Q6ZNH5 498 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 GATAD1Q8WUU5 269 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 HIST1H2BAQ96A08 127 aa9.32□□□□□ -0.92
LINC00346-201ENST00000538077 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
LINC00346-201ENST00000538077 PAX1P15863 534 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 NPC2P61916 151 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 LRTM2Q8N967 370 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF414Q96IQ9 312 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 COL25A1Q9BXS0 654 aaPredicted RBP9.31□□□□□ -0.92
LINC00346-201ENST00000538077 TMEM200BQ69YZ2 307 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 SIGLEC15Q6ZMC9 328 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 NTN3O00634 580 aaPredicted RBP9.31□□□□□ -0.92
LINC00346-201ENST00000538077 PLP1P60201 277 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 CD200R1LQ6Q8B3 271 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 DOCK3Q8IZD9 2030 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 UNC13CQ8NB66 2214 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 EFNB1P98172 346 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 RCC1LQ96I51 464 aaKnown RBP9.31□□□□□ -0.92
LINC00346-201ENST00000538077 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
LINC00346-201ENST00000538077 NINQ8N4C6 2090 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 CNTFRP26992 372 aa9.31□□□□□ -0.92
LINC00346-201ENST00000538077 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 MYOD1P15172 320 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 PAX8Q06710 450 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 SLC25A34Q6PIV7 304 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 CRIM1Q9NZV1 1036 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 SCN10AQ9Y5Y9 1956 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
LINC00346-201ENST00000538077 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF329Q86UD4 541 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 TMEM50AO95807 157 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 RUSC1-AS1Q66K80 236 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF525Q8N782 197 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 TCF23Q7RTU1 214 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 PARD6GQ9BYG4 376 aaPredicted RBP9.3□□□□□ -0.92
LINC00346-201ENST00000538077 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 H3BRM9 83 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 SP5Q6BEB4 398 aaPredicted RBP9.3□□□□□ -0.92
LINC00346-201ENST00000538077 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 ERASQ7Z444 233 aa9.3□□□□□ -0.92
LINC00346-201ENST00000538077 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms