RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 C11orf42Q8N5U0 333 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 P2RX4Q99571 388 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 GSX1Q9H4S2 264 aaPredicted RBP10.24□□□□□ -0.77
SCN3B-206ENST00000530277 UBTD1Q9HAC8 227 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 IGLV3-1P01715 115 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 IGKV1-16P04430 117 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
SCN3B-206ENST00000530277 LYL1P12980 280 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 PRRX1P54821 245 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 ASCL2Q99929 193 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 CD82P27701 267 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 GPR6P46095 362 aaPredicted RBP10.24□□□□□ -0.77
SCN3B-206ENST00000530277 PNKDQ8N490 385 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 REV3LO60673 3130 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 M0R2Z0 102 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 SCGB2A1O75556 95 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 HOXA5P20719 270 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 TAS2R60P59551 318 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 GNG5P63218 68 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 VAMP3Q15836 100 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 RBM14Q96PK6 669 aaKnown RBP10.24□□□□□ -0.77
SCN3B-206ENST00000530277 RNF2Q99496 336 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 NEU1Q99519 415 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 HSPB7Q9UBY9 170 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 NAGKQ9UJ70 344 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 AMMECR1Q9Y4X0 333 aaPredicted RBP10.24□□□□□ -0.77
SCN3B-206ENST00000530277 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 ZNF474Q6S9Z5 364 aaPredicted RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 TUBA4BQ9H853 241 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 FOXI3A8MTJ6 420 aaPredicted RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 TMEM250H0YL14 139 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 IGHV1-46P01743 117 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 HOXB1P14653 301 aaPredicted RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 PRR30Q53SZ7 412 aaPredicted RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 KHDC1LQ5JSQ8 128 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 Q6ZN92 141 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 WDR31Q8NA23 367 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 IGFBPL1Q8WX77 278 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 WNT10AQ9GZT5 417 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 FRYQ5TBA9 3013 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 NAV3Q8IVL0 2385 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
SCN3B-206ENST00000530277 IFNL4K9M1U5 179 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 P01737 135 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 Q6ZPA2 131 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 SCNM1Q9BWG6 230 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 DNAJC4Q9NNZ3 241 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 RNF115Q9Y4L5 304 aa10.23□□□□□ -0.77
SCN3B-206ENST00000530277 FCER1GP30273 86 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 SSC4DQ8WTU2 575 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 PGLYRP4Q96LB8 373 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 OR2J3O76001 311 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 ZNF726P1Q15940 193 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 HAPLN4Q86UW8 402 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 LINC00479Q96M42 142 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 SSBP4Q9BWG4 385 aaPredicted RBP10.22□□□□□ -0.77
SCN3B-206ENST00000530277 DSPP15924 2871 aaKnown RBP10.22□□□□□ -0.77
SCN3B-206ENST00000530277 IGHV3-66A0A0C4DH42 116 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 C20orf202A1L168 122 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 K7EM74 188 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 IGHV2-70P01814 119 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 C8orf88P0DMB2 117 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 TMEM106BQ9NUM4 274 aa10.22□□□□□ -0.77
SCN3B-206ENST00000530277 SRRM5B3KS81 715 aa10.21□□□□□ -0.77
SCN3B-206ENST00000530277 DIRC3C9JPN6 131 aa10.21□□□□□ -0.77
SCN3B-206ENST00000530277 MPDU1O75352 247 aa10.21□□□□□ -0.77
SCN3B-206ENST00000530277 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
SCN3B-206ENST00000530277 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.78
SCN3B-206ENST00000530277 HYPMO75409 117 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 SCGB2A2Q13296 93 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 COTL1Q14019 142 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 C19orf35Q6ZS72 473 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM256Q8N2U0 113 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 RAB1CQ92928 201 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 PPIAL4CA0A0B4J2A2 164 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 IGHV1-69-2A0A0G2JMI3 117 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 SIAH2O43255 324 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 MMP23AO75900 390 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 APCSP02743 223 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 PPIAL4GP0DN37 164 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.78
SCN3B-206ENST00000530277 EFNB3Q15768 340 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 OR4C13Q8NGP0 309 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM131Q92545 1883 aa10.21□□□□□ -0.78
SCN3B-206ENST00000530277 TIMP3P35625 211 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 GGTLC1Q9BX51 225 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms