RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CSN3P07498 182 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 OR4E1P0C645 316 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 ERHP84090 104 aaKnown RBP9.54□□□□□ -0.88
SMCO4-202ENST00000525141 NMSQ5H8A3 153 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 ADAMTSL5Q6ZMM2 481 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 LYZL2Q7Z4W2 148 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 PDCD10Q9BUL8 212 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 PRR13Q9NZ81 148 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
SMCO4-202ENST00000525141 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
SMCO4-202ENST00000525141 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 A0A1B0GU03 582 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 NDUFB8O95169 186 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 SULT1A3P0DMM9 295 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 SULT1A4P0DMN0 295 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 ZP3P21754 424 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 SPCS3P61009 180 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 IFITM3Q01628 133 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 ANKRD55Q3KP44 614 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 OR2C3Q8N628 320 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 ZNF114Q8NC26 417 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 C20orf85Q9H1P6 137 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 CACNG5Q9UF02 275 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 TMED3Q9Y3Q3 217 aa9.53□□□□□ -0.88
SMCO4-202ENST00000525141 IZUMO1RA6ND01 250 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 BMPR1BO00238 502 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 HLA-AP01891 365 aaKnown RBP9.52□□□□□ -0.89
SMCO4-202ENST00000525141 SLC25A6P12236 298 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 DHRS2Q13268 280 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 SMCO1Q147U7 214 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 SLC25A24Q6NUK1 477 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 VN1R17PQ8TDU5 208 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 CXorf58Q96LI9 332 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 ELOVL1Q9BW60 279 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.89
SMCO4-202ENST00000525141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
SMCO4-202ENST00000525141 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 ANXA7P20073 488 aaKnown RBP9.51□□□□□ -0.89
SMCO4-202ENST00000525141 SNCAP37840 140 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 MFAP2P55001 183 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 EXOSC2Q13868 293 aaKnown RBP9.51□□□□□ -0.89
SMCO4-202ENST00000525141 C4orf46Q504U0 113 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 NUDT15Q9NV35 164 aa9.51□□□□□ -0.89
SMCO4-202ENST00000525141 TRAV6A0A075B6T7 132 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 A8MZ25 164 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 PITX3O75364 302 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 H2AFB2P0C5Z0 115 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 EDN2P20800 178 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMCO4-202ENST00000525141 DEFA1P59665 94 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 DEFA3P59666 94 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 MITD1Q8WV92 249 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 EEF1AKMT3Q96AZ1 226 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 ENY2Q9NPA8 101 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 HSPB7Q9UBY9 170 aa9.5□□□□□ -0.89
SMCO4-202ENST00000525141 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
SMCO4-202ENST00000525141 TNFRSF9Q07011 255 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 TATDN3Q17R31 274 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 BSXQ3C1V8 233 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 SPINK9Q5DT21 86 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 GGNBP1Q5YKI7 109 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
SMCO4-202ENST00000525141 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
SMCO4-202ENST00000525141 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 CEBPZOSA8MTT3 80 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 PPP5D1E7EU14 171 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 K7EIM0 57 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
SMCO4-202ENST00000525141 OR2C1O95371 312 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 IFNA21P01568 189 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 IGHV3-23P01764 117 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 CLEC3BP05452 202 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 HOXB5P09067 269 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
SMCO4-202ENST00000525141 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
SMCO4-202ENST00000525141 HTR2BP41595 481 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
SMCO4-202ENST00000525141 RPEL1Q2QD12 228 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 CLEC19AQ6UXS0 136 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 OR1S1Q8NH92 325 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 ENKURQ8TC29 256 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 SCARB1Q8WTV0 552 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 CCDC140Q96MF4 163 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms