RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 LRRC18Q8N456 261 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 VCXQ9H320 206 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 SLC39A9Q9NUM3 307 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 HSPB8Q9UJY1 196 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 BLMP54132 1417 aaPredicted RBP3.49□□□□□ -1.85
USP47-204ENST00000525078 ITSN2Q9NZM3 1697 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 SHROOM2Q13796 1616 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 CAMSAP2Q08AD1 1489 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 NLRC5Q86WI3 1866 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 BCORL1Q5H9F3 1711 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 A0A1B0GX51 115 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 A8MUU9 505 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 LEPROTO15243 131 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 LY6HO94772 140 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 IGHV1-69P01742 117 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 ZNF286BP0CG31 522 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 CCL3P10147 92 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 RPS3P23396 243 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP47-204ENST00000525078 CMPK1P30085 196 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 AKR1C1Q04828 323 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 RRN3P1Q2M238 152 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 LGALSLQ3ZCW2 172 aaPredicted RBP3.48□□□□□ -1.85
USP47-204ENST00000525078 Q6ZQT7 251 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 C3orf22Q8N5N4 141 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 CNEP1R1Q8N9A8 125 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 OR5A1Q8NGJ0 315 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 BORCS8Q96FH0 119 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 UPK3BQ9BT76 320 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 TTTY13Q9BZ97 58 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 TUBA4BQ9H853 241 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 TPT1P8Q9HAU6 139 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 KIF13BQ9NQT8 1826 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 AGRNO00468 2067 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 RFX7Q2KHR2 1363 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 ADCY10Q96PN6 1610 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 NUP205Q92621 2012 aa3.48□□□□□ -1.85
USP47-204ENST00000525078 ADGRL2O95490 1459 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 POLA1P09884 1462 aaPredicted RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 DNMBPQ6XZF7 1577 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 TECPR2O15040 1411 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 C7orf66A4D0T2 115 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 FABP5P3A8MUU1 101 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 H3BQ85 93 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 TAX1BP3O14907 124 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 SULT1C4O75897 302 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 WISP3O95389 354 aaPredicted RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 BCL2P10415 239 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 HLA-DMBP28068 263 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 SDC4P31431 198 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 S100A11P31949 105 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 CCR2P41597 374 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 RPL18Q07020 188 aaKnown RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 RTL8BQ17RB0 113 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 SPANXN3Q5MJ09 141 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 BCL2L15Q5TBC7 163 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 HRCT1Q6UXD1 115 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 ZNF705AQ6ZN79 300 aaPredicted RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 SDIM1Q6ZPB5 146 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 BPIFA4PQ86YQ2 179 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 TMEM229BQ8NBD8 167 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 APCDD1LQ8NCL9 501 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 SEC22CQ9BRL7 303 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 RTL8AQ9BWD3 113 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 MED31Q9Y3C7 131 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 MEGF6O75095 1541 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 EPRSP07814 1512 aaKnown RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 ABCC2Q92887 1545 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 NESP48681 1621 aa3.47□□□□□ -1.85
USP47-204ENST00000525078 EIF2AK4Q9P2K8 1649 aaKnown RBP3.47□□□□□ -1.85
USP47-204ENST00000525078 C17orf51A8MQB3 221 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 C5orf58C9J3I9 102 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 BUB1B-PAK6H3BSN5 160 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 TRGC2P03986 189 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 UBBP0CG47 229 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 HOXB6P17509 224 aaKnown RBP3.46□□□□□ -1.86
USP47-204ENST00000525078 SRP14P37108 136 aaKnown RBP3.46□□□□□ -1.86
USP47-204ENST00000525078 RBM11P57052 281 aaKnown RBP3.46□□□□□ -1.86
USP47-204ENST00000525078 YPEL3P61236 119 aaPredicted RBP3.46□□□□□ -1.86
USP47-204ENST00000525078 TRAPPC6BQ86SZ2 158 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 PPTC7Q8NI37 304 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 GPX7Q96SL4 187 aaPredicted RBP3.46□□□□□ -1.86
USP47-204ENST00000525078 AICDAQ9GZX7 198 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 RNF122Q9H9V4 155 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 ZNF835Q9Y2P0 537 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 SHANK2Q9UPX8 1470 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 REREQ9P2R6 1566 aa3.46□□□□□ -1.86
USP47-204ENST00000525078 ARHGAP31Q2M1Z3 1444 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 TRPM1Q7Z4N2 1603 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 RNF17Q9BXT8 1623 aaKnown RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 IGHV3-73A0A0B4J1V6 119 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 IGKV6D-41A0A0C4DH26 115 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 LOC102725191A0A1B0GVB3 256 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 TRDV1A0A1B0GX56 115 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 C19orf71A6NCJ1 209 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 ZNF860A6NHJ4 632 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 UBFD1O14562 309 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms