RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 NANPQ8TBE9 248 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 TCEAL7Q9BRU2 100 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 PSMG3Q9BT73 122 aaPredicted RBP18.67■□□□□ 0.58
SLIT3-204ENST00000518140 RPRMQ9NS64 109 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 IGHV3OR16-10A0A075B7F0 116 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 SAA4P35542 130 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 MMD2Q8IY49 270 aa18.67■□□□□ 0.58
SLIT3-204ENST00000518140 REG1AP05451 166 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 APELAP0DMC3 54 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 ELLP55199 621 aaPredicted RBP18.66■□□□□ 0.58
SLIT3-204ENST00000518140 HES1Q14469 280 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 MMDQ15546 238 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 TREML4Q6UXN2 200 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 CENPVQ7Z7K6 275 aaPredicted RBP18.66■□□□□ 0.58
SLIT3-204ENST00000518140 RNF5Q99942 180 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 WDR83OSQ9Y284 106 aa18.66■□□□□ 0.58
SLIT3-204ENST00000518140 MOSP00540 346 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 DSCR9P59020 149 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 C2orf83Q53S99 150 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 ZNF506Q5JVG8 444 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 NPCDR1Q9BY65 106 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 NAV2Q8IVL1 2488 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 H3BQ15 152 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 SCAF4O95104 1147 aaKnown RBP18.65■□□□□ 0.58
SLIT3-204ENST00000518140 HBE1P02100 147 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 HSPB1P04792 205 aaKnown RBP18.65■□□□□ 0.58
SLIT3-204ENST00000518140 RAB2AP61019 212 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 DLK1P80370 383 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 HAGHQ16775 308 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 ACSM6Q6P461 480 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 SLC16A13Q7RTY0 426 aa18.65■□□□□ 0.58
SLIT3-204ENST00000518140 AP4M1O00189 453 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 COMPP49747 757 aaPredicted RBP18.64■□□□□ 0.57
SLIT3-204ENST00000518140 ERHP84090 104 aaKnown RBP18.64■□□□□ 0.57
SLIT3-204ENST00000518140 ICAM4Q14773 271 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 FAM120AOSQ5T036 256 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 CCDC144NLQ6NUI1 221 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 C19orf35Q6ZS72 473 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 GGACTQ9BVM4 153 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 TBL2Q9Y4P3 447 aaKnown RBP18.64■□□□□ 0.57
SLIT3-204ENST00000518140 A0A1W2PN81 502 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 IGLC7A0M8Q6 106 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 INS-IGF2F8WCM5 200 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 CHRNA7P36544 502 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 SERF2P84101 59 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 PLGLAQ15195 96 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 SSX7Q7RTT5 188 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 TIMM9Q9Y5J7 89 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 ZFHX3Q15911 3703 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 APCP25054 2843 aa18.64■□□□□ 0.57
SLIT3-204ENST00000518140 A0A087WWC5 75 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 OOSP1A8MZH6 123 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 NPFFO15130 113 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 ACTL6BO94805 426 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 AREGP15514 252 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 RPL27AP46776 148 aaKnown RBP18.63■□□□□ 0.57
SLIT3-204ENST00000518140 ZNF726P1Q15940 193 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 RUSC1-AS1Q66K80 236 aa18.63■□□□□ 0.57
SLIT3-204ENST00000518140 A0A096LNT2 108 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 NBR2O15453 112 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 MSMBP08118 114 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 NPBQ8NG41 125 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 P2RX4Q99571 388 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 MAPK1IP1LQ8NDC0 245 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 OR2T10Q8NGZ9 312 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 PSMG3-AS1Q96PY0 264 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 MGST2Q99735 147 aa18.62■□□□□ 0.57
SLIT3-204ENST00000518140 TAGLN2P37802 199 aaKnown RBP18.61■□□□□ 0.57
SLIT3-204ENST00000518140 KHDC3LQ587J8 217 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 TRAV1-1A0A0B4J248 108 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 TEX22C9J3V5 150 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 FFAR4Q5NUL3 377 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 RPP25LQ8N5L8 163 aaKnown RBP18.61■□□□□ 0.57
SLIT3-204ENST00000518140 Q8N6K4 173 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 TVP23CQ96ET8 276 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 NPVFQ9HCQ7 196 aa18.61■□□□□ 0.57
SLIT3-204ENST00000518140 LSM4Q9Y4Z0 139 aaKnown RBP18.61■□□□□ 0.57
SLIT3-204ENST00000518140 ABCA1O95477 2261 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 NDUFA3O95167 84 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 SLC25A16P16260 332 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 TMEM41BQ5BJD5 291 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 BRD3OSQ6XYD6 125 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 ZNF709Q8N972 641 aa18.6■□□□□ 0.57
SLIT3-204ENST00000518140 DEFA4P12838 97 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 CEBPGP53567 150 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 MFAP2P55001 183 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 EBI3Q14213 229 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 DEFB113Q30KQ7 82 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 CYB561D1Q8N8Q1 229 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 RCC1LQ96I51 464 aaKnown RBP18.59■□□□□ 0.57
SLIT3-204ENST00000518140 SOX21Q9Y651 276 aaPredicted RBP18.59■□□□□ 0.57
SLIT3-204ENST00000518140 ZNF727A8MUV8 499 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 IGHV3-48P01763 117 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 FABP1P07148 127 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 ATP5IP56385 69 aaPredicted RBP18.59■□□□□ 0.57
SLIT3-204ENST00000518140 GCSAMLQ5JQS6 135 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 OR10G4Q8NGN3 311 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 SRSF12Q8WXF0 261 aaKnown RBP18.59■□□□□ 0.57
SLIT3-204ENST00000518140 NIPSNAP3BQ9BS92 247 aa18.59■□□□□ 0.57
SLIT3-204ENST00000518140 NIT2Q9NQR4 276 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms