RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-223ENST00000515854 OR2T10Q8NGZ9 312 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 RNASEH2CQ8TDP1 164 aaKnown RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 SFT2D1Q8WV19 159 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 NARS2Q96I59 477 aaKnown RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 MGST2Q99735 147 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 SRSF8Q9BRL6 282 aaKnown RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 GGTLC1Q9BX51 225 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 EIF5A2Q9GZV4 153 aaKnown RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 FBXL15Q9H469 300 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 LPAR2Q9HBW0 351 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 KCNIP2Q9NS61 270 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 SLC39A9Q9NUM3 307 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 MALRD1Q5VYJ5 2156 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 TPRP12270 2363 aaKnown RBP3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 DOPEY1Q5JWR5 2465 aa3.58□□□□□ -1.84
ATP2C1-223ENST00000515854 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 CENPVL3A0A0U1RRI6 287 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 LOC102723971A0A1B0GUV8 181 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 A0A1B0GV50 99 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 MAP1LC3B2A6NCE7 125 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 ARID1AO14497 2285 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 NPFFO15130 113 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 NDUFS6O75380 124 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SCO1O75880 301 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 ACTL6BO94805 426 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 HSPB1P04792 205 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 CRYGCP07315 174 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SRP19P09132 144 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SFTA3P0C7M3 94 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 LINC00869P0C866 280 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 AREGP15514 252 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SLC25A16P16260 332 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 YLPM1P49750 1951 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SUMO1P63165 101 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 ABCA4P78363 2273 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 RAB31Q13636 194 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 HNF4GQ14541 408 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 ICAM4Q14773 271 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 MMDQ15546 238 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 MLANAQ16655 118 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 GUCA2BQ16661 112 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 C5orf64Q2M2E5 130 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 KHDC3LQ587J8 217 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 MIC13Q5XKP0 118 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 FAM122CQ6P4D5 195 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 LCN15Q6UWW0 184 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SLC16A13Q7RTY0 426 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 THAP8Q8NA92 274 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 OR1P1Q8NH06 330 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 C17orf50Q8WW18 174 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SRSF12Q8WXF0 261 aaKnown RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 NRGNQ92686 78 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 RAB24Q969Q5 203 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 PERPQ96FX8 193 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 CCDC140Q96MF4 163 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 RARRES2Q99969 163 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 MAP1LC3BQ9GZQ8 125 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SLC35B3Q9H1N7 401 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 SLC45A2Q9UMX9 530 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 PXMP4Q9Y6I8 212 aa3.57□□□□□ -1.84
ATP2C1-223ENST00000515854 CACNA1BQ00975 2339 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 UBR5O95071 2799 aaPredicted RBP3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 IGKV1D-37A0A075B6S9 117 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 IGKV1OR2-108A0A075B7D4 117 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 A0A096LNT2 108 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 IGHV1-69DA0A0B4J2H0 117 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 CORTO00230 105 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 TSPAN9O75954 239 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 IFNA1P01562 189 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 IGHV1-69P01742 117 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 REG1AP05451 166 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 MSMBP08118 114 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 FAM106CPP0CH98 169 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 STAG3L2P0CL84 134 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 STAG3L3P0CL85 134 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 BCL2P10415 239 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 TMEM11P17152 192 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 CTRB1P17538 263 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 CD24P25063 80 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 PAX6P26367 422 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 OR10J1P30954 320 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 BRS3P32247 399 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 SAA4P35542 130 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 TAGLN2P37802 199 aaKnown RBP3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 CDC34P49427 236 aaPredicted RBP3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 PPT1P50897 306 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 MFAP2P55001 183 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 FGF8P55075 233 aaPredicted RBP3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 KRTAP10-9P60411 292 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 B2MP61769 119 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 GNB1P62873 340 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 DEFA5Q01523 94 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 HES1Q14469 280 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 FXYD3Q14802 87 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 PLGLAQ15195 96 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 HAGHQ16775 308 aa3.56□□□□□ -1.84
ATP2C1-223ENST00000515854 CLEC12BQ2HXU8 276 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms