RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 BTF3L4Q96K17 158 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 DUX5Q96PT3 197 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 PSG11Q9UQ72 335 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 VWC2LB2RUY7 222 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 SERF1AO75920 110 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 CECR9P0C854 216 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 KLF3P57682 345 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 BSPH1Q075Z2 132 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 TCTEX1D1Q8N7M0 179 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 PGAM5Q96HS1 289 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 LAMP3Q9UQV4 416 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 UBR5O95071 2799 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 DPRXA6NFQ7 191 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 SIVA1O15304 175 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 RAMP3O60896 148 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 APOHP02749 345 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 PRH1P02810 166 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 RANP62826 216 aaKnown RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 RPL30P62888 115 aaKnown RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 UBE2V1Q13404 147 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 CDSNQ15517 529 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 LEMD1Q68G75 181 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 OR10V1Q8NGI7 309 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 OR5A2Q8NGI9 324 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 IGFBPL1Q8WX77 278 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 SMIM7Q9BQ49 75 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 NPFFR1Q9GZQ6 430 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 SLC25A10Q9UBX3 287 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-205ENST00000514271 DMXL2Q8TDJ6 3036 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 CACNA1CQ13936 2221 aa6.03□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF850A8MQ14 1090 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 SHISA9B4DS77 424 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 C15orf65H3BRN8 121 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 CGB3P0DN86 165 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 CGB7P0DN87 165 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 PSG3Q16557 428 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 Q6ZR03 302 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 MRPL21Q7Z2W9 205 aaKnown RBP6.02□□□□□ -1.44
CLIP1-205ENST00000514271 MGST2Q99735 147 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 LINC00574Q9H8X3 128 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 OR1A1Q9P1Q5 309 aa6.02□□□□□ -1.44
CLIP1-205ENST00000514271 IGLV3-9A0A075B6K5 115 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 C20orf202A1L168 122 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 SRRM4A7MD48 611 aaKnown RBP6.02□□□□□ -1.45
CLIP1-205ENST00000514271 INS-IGF2F8WCM5 200 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 GPR12P47775 334 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 SPIN3Q5JUX0 258 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 TCF23Q7RTU1 214 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 OR4B1Q8NGF8 309 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 OCC1Q8TAD7 63 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 KCNS1Q96KK3 526 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 KIR2DS1A0A191URI9 304 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 A1L4Q6 167 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 CBY3A6NI87 242 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF785A8K8V0 405 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 BMPR1BO00238 502 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 IGHV3-13P01766 116 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 IGHV3-9P01782 118 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 COL8A2P25067 703 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 KIR2DS4P43632 304 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 FABP6P51161 128 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 KIR2DS1Q14954 304 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 C1orf229Q6ZS94 237 aaPredicted RBP6.02□□□□□ -1.45
CLIP1-205ENST00000514271 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 DRAM1Q8N682 238 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 RITA1Q96K30 269 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 TBX15Q96SF7 602 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 CHRDL1Q9BU40 450 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 TMEM147Q9BVK8 224 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 CXXC4Q9H2H0 198 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 ZMAT4Q9H898 229 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 GNB4Q9HAV0 340 aa6.02□□□□□ -1.45
CLIP1-205ENST00000514271 RAB29O14966 203 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 ATP5G3P48201 142 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 IZUMO4Q1ZYL8 232 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 ABCA11PQ4W5N1 156 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF645Q8N7E2 425 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 NRGNQ92686 78 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 HEYLQ9NQ87 328 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-205ENST00000514271 TSSC4Q9Y5U2 329 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-205ENST00000514271 IGHV1-69-2A0A0G2JMI3 117 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 TAX1BP3O14907 124 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 FGF6P10767 208 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 RAB7AP51149 207 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 SEC61GP60059 68 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 TMEM183BQ1AE95 376 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 TREML4Q6UXN2 200 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF695Q8IW36 515 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 FGFRL1Q8N441 504 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 OR5B3Q8NH48 314 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 PSENENQ9NZ42 101 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 KCNIP1Q9NZI2 227 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 CACNG5Q9UF02 275 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 SPTA1P02549 2419 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 A0A096LPE4 126 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms