RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 LIME1Q9H400 295 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 CEP295Q9C0D2 2601 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 TMEM131Q92545 1883 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 TIMM23O14925 209 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 CGAP01215 116 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 Q6ZRM9 215 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 CLDND2Q8NHS1 167 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 SLC31A2O15432 143 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 GATA4P43694 442 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 AUP1Q9Y679 476 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 IGHV2-26A0A0B4J1V2 119 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 A0A0G2JRQ6 117 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 A0A1W2PS18 150 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 J3KRW8 73 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 ISLRO14498 428 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 LY6HO94772 140 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 PAFAH1B2P68402 229 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 CD69Q07108 199 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 ATRAIDQ6UW56 229 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 ARPC1AQ92747 370 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 SGK494Q96LW2 274 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 C21orf62Q9NYP8 219 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 ZNF257Q9Y2Q1 563 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 S4R3C0 116 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 MAS1LP35410 378 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 CFHR2P36980 270 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 TEX29Q8N6K0 151 aa10.8□□□□□ -0.68
PCDHA4-202ENST00000512229 TGFAP01135 160 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 LYPD2Q6UXB3 125 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 TOMM20LQ6UXN7 152 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 ATRXP46100 2492 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 VENTXO95231 258 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 CSN3P07498 182 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 COL8A2P25067 703 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 ZNF585BQ52M93 769 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 Q8NFD4 153 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 DKK4Q9UBT3 224 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 FOXA2Q9Y261 457 aaPredicted RBP10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 TEX50A0A1B0GTY4 177 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 RAB9AP51151 201 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 ZNF383Q8NA42 475 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 TMEM208Q9BTX3 173 aa10.79□□□□□ -0.68
PCDHA4-202ENST00000512229 RPL29P47914 159 aaKnown RBP10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 SLC25A48Q6ZT89 311 aaKnown RBP10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 OR10W1Q8NGF6 305 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 C16orf92Q96LL3 132 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 NPPCP23582 126 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 MEOX2P50222 304 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 ZNF137PP52743 207 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 CCL20P78556 96 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 HOXA4Q00056 320 aaPredicted RBP10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 DCAF16Q9NXF7 216 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 ARL2-SNX15V9GYD0 113 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 LYPD6Q86Y78 171 aa10.78□□□□□ -0.68
PCDHA4-202ENST00000512229 F5H697 171 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 MT-ND6P03923 174 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 KLHDC1Q8N7A1 406 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 HIST1H2BAQ96A08 127 aa10.77□□□□□ -0.68
PCDHA4-202ENST00000512229 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 TRAV3A0A0B4J244 114 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 LYL1P12980 280 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 SLC25A33Q9BSK2 321 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 UFC1Q9Y3C8 167 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 CDH23Q9H251 3354 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 TGIF2-C20orf24A0A0A6YYL0 155 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 TRGV3P03979 118 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 ATP5G3P48201 142 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 FAM106AQ4KMX7 169 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 SLX1AQ9BQ83 275 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 C1QTNF9BB2RNN3 333 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 C1QTNF9P0C862 333 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV3OR16-13A0A075B7E8 117 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV3-74A0A0B4J1X5 117 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ITGB1BP1O14713 200 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 APCSP02743 223 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ANOS1P23352 680 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ID1P41134 155 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 Q6ZSR3 168 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 PACRGQ96M98 296 aaPredicted RBP10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ARFGEF3Q5TH69 2177 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms