RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 NANPQ8TBE9 248 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
HTT-209ENST00000512068 C17orf50Q8WW18 174 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 SSMEM1Q8WWF3 244 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 ARPC1AQ92747 370 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 CXorf58Q96LI9 332 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 RSG1Q9BU20 258 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 NPVFQ9HCQ7 196 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 PARP11Q9NR21 331 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 PITPNC1Q9UKF7 332 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.45□□□□□ -1.382e-6■■■□□ 16.1
HTT-209ENST00000512068 ABCA2Q9BZC7 2435 aa6.45□□□□□ -1.38
HTT-209ENST00000512068 COL12A1Q99715 3063 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 USP9YO00507 2555 aaPredicted RBP6.44□□□□□ -1.38
HTT-209ENST00000512068 A0A0U1RQK1 487 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 PMS2P5A8MQ11 134 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 FGF16O43320 207 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 SCGB2A1O75556 95 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 HBE1P02100 147 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 REG1AP05451 166 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 RNASE2P10153 161 aaKnown RBP6.44□□□□□ -1.38
HTT-209ENST00000512068 PAX6P26367 422 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 VWC2Q2TAL6 325 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 ACOT6Q3I5F7 207 aaPredicted RBP6.44□□□□□ -1.38
HTT-209ENST00000512068 TMEM41BQ5BJD5 291 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 FFAR4Q5NUL3 377 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 PXDC1Q5TGL8 231 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 IL34Q6ZMJ4 242 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 SLC16A13Q7RTY0 426 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 LFNGQ8NES3 379 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 CACNG8Q8WXS5 425 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 SSX3Q99909 188 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 SLC25A33Q9BSK2 321 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 NPCDR1Q9BY65 106 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 HRH4Q9H3N8 390 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 MED9Q9NWA0 146 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
HTT-209ENST00000512068 CR1P17927 2039 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 A0A096LNT2 108 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 M0QZK8 103 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 APELAP0DMC3 54 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 GPX4P36969 197 aaPredicted RBP6.43□□□□□ -1.38
HTT-209ENST00000512068 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 CD69Q07108 199 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 FAM120AOSQ5T036 256 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 ZNF562Q6V9R5 426 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 COMMD1Q8N668 190 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 Q8N6K4 173 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 ZNF114Q8NC26 417 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 OR1P1Q8NH06 330 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 MARC2Q969Z3 335 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 P2RX4Q99571 388 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 FOXC2Q99958 501 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 PBDC1Q9BVG4 233 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 MEGF9Q9H1U4 602 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 THYN1Q9P016 225 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
HTT-209ENST00000512068 A0A1W2PPV4 95 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 H3BUX3 64 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 I3L521 148 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 FCN1O00602 326 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 PLXNB1O43157 2135 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 MT-CO2P00403 227 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 IFNA1P01562 189 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 HLA-DRB1P01911 266 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 FAM157CP0CG43 387 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 AREGP15514 252 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 LY6EQ16553 131 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 AANATQ16613 207 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 BSXQ3C1V8 233 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 C9orf152Q5JTZ5 239 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 UQCC3Q6UW78 93 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 C16orf82Q7Z2V1 217 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 TMEM144Q7Z5S9 345 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 Q8N9W7 124 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 OR10G4Q8NGN3 311 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 OR10G9Q8NGN4 311 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 OR10G7Q8NGN6 311 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 ACY3Q96HD9 319 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 NARS2Q96I59 477 aaKnown RBP6.42□□□□□ -1.38
HTT-209ENST00000512068 TMEM68Q96MH6 324 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 RBM14Q96PK6 669 aaKnown RBP6.42□□□□□ -1.38
HTT-209ENST00000512068 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
HTT-209ENST00000512068 SLC39A9Q9NUM3 307 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 F11RQ9Y624 299 aaKnown RBP6.42□□□□□ -1.38
HTT-209ENST00000512068 PTPN13Q12923 2485 aa6.42□□□□□ -1.38
HTT-209ENST00000512068 A0A1B0GV50 99 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 CGB1A6NKQ9 187 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 ZFP92A6NM28 416 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 TEX22C9J3V5 150 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 E7EUB6 86 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 FABP1P07148 127 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 M6PRP20645 277 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms